RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 DUS1LQ6P1R4 473 aaKnown RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 FAM171BQ6P995 826 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 ZPBP2Q6X784 338 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 GPRIN1Q7Z2K8 1008 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 RD3Q7Z3Z2 195 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 VRK2Q86Y07 508 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 ECHDC2Q86YB7 292 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 LILRA2Q8N149 483 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 TTC29Q8NA56 475 aaPredicted RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 MLKLQ8NB16 471 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 CADM4Q8NFZ8 388 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 OR4K14Q8NGD5 310 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 WFDC12Q8WWY7 111 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 ERLEC1Q96DZ1 483 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 ELMOD3Q96FG2 381 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 TMEM176AQ96HP8 235 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 THOC3Q96J01 351 aaKnown RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 LRRC37BQ96QE4 947 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 OSBPL9Q96SU4 736 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 CD180Q99467 661 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 MECRQ9BV79 373 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 CDADC1Q9BWV3 514 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 DERL2Q9GZP9 239 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 GAL3ST2Q9H3Q3 398 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 SAV1Q9H4B6 383 aaPredicted RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 MINDY3Q9H8M7 445 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 ACTR8Q9H981 624 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 CNOT10Q9H9A5 744 aaKnown RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 DMAP1Q9NPF5 467 aaPredicted RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 SLAMF7Q9NQ25 335 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 GRHL1Q9NZI5 618 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 UBQLN2Q9UHD9 624 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PALD1Q9ULE6 856 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 ENTPD4Q9Y227 616 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PLLPQ9Y342 182 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 RHBDD3Q9Y3P4 386 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 ENTPD2Q9Y5L3 495 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 CCDC171Q6TFL3 1326 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 ITPR1Q14643 2758 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 DSPP15924 2871 aaKnown RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 ATAD5Q96QE3 1844 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 TRAV25A0A0B4J276 109 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 C13orf42A0A1B0GVH6 325 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PDZK1P1A8MUH7 402 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 TCP10L2B9ZVM9 353 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 DHX15O43143 795 aaKnown RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 B4GAT1O43505 415 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 LIASO43766 372 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 LPXNO60711 386 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PAGE4O60829 102 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 OPHN1O60890 802 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 GPX5O75715 221 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 RNF8O76064 485 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PRSS23O95084 383 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 BCL10O95999 233 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 OR52Z1P0C646 297 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 BMP2P12643 396 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 GNSP15586 552 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 EIF2S2P20042 333 aaKnown RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 RAB4AP20338 218 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 G0S2P27469 103 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PIK3R1P27986 724 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 FDFT1P37268 417 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 VIPR2P41587 438 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 CDKN2CP42773 168 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 SLC1A4P43007 532 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 SLC6A12P48065 614 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 CSNK1DP48730 415 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 RGS7P49802 495 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 DAOAP59103 153 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 UBE2G2P60604 165 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 RPL23AP62750 156 aaKnown RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 TLE1Q04724 770 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 RESTQ13127 1097 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 SNW1Q13573 536 aaKnown RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 CUL3Q13618 768 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PDE7AQ13946 482 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 NKG7Q16617 165 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 SGSM1Q2NKQ1 1148 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 UGT3A2Q3SY77 523 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 IQCCQ4KMZ1 466 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PDCD4Q53EL6 469 aaKnown RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PPM1JQ5JR12 505 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 EOGTQ5NDL2 527 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PDZK1Q5T2W1 519 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PRAMEF5Q5TYX0 476 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 FAM171A1Q5VUB5 890 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 CDKAL1Q5VV42 579 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PRAMEF9Q5VWM5 478 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 PRAMEF6Q5VXH4 476 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 RGS7BPQ6MZT1 257 aaPredicted RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 APOBEC3HQ6NTF7 200 aaKnown RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 TMIGD1Q6UXZ0 262 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 SLC39A5Q6ZMH5 540 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 C11orf57Q6ZUT1 292 aaPredicted RBP3.8□□□□□ -1.8
CLHC1-201ENST00000401408 MED25Q71SY5 747 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 LUZP2Q86TE4 346 aa3.8□□□□□ -1.8
CLHC1-201ENST00000401408 FAM90A1Q86YD7 464 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms