RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 CTSL3PQ5NE16 218 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 PTRHD1Q6GMV3 140 aaKnown RBP11.45□□□□□ -0.58
TFF3-202ENST00000398431 TTC23LQ6PF05 361 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 SIRT6Q8N6T7 355 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 KIF18AQ8NI77 898 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 ITLN2Q8WWU7 325 aaPredicted RBP11.45□□□□□ -0.58
TFF3-202ENST00000398431 NR4A3Q92570 626 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 C16orf45Q96MC5 204 aaPredicted RBP11.45□□□□□ -0.58
TFF3-202ENST00000398431 BIRC8Q96P09 236 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 DESI2Q9BSY9 194 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 DPH7Q9BTV6 452 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 RAB6BQ9NRW1 208 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 GALPQ9UBC7 116 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 COPG2Q9UBF2 871 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 ANAPC5Q9UJX4 755 aa11.45□□□□□ -0.58
TFF3-202ENST00000398431 LOC102723996A0A087X1L8 192 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 IGHV1-45A0A0A0MS14 117 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 NSG1A0A0A6YYJ2 146 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 TRAV17A0A0B4J275 112 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 IDSB3KWA1 339 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 FOXS1O43638 330 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 USP1O94782 785 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 BMP10O95393 424 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 F10P00742 488 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 IFNB1P01574 187 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 ERGP11308 486 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 ARNTP27540 789 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 NMBRP28336 390 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 RPL22P35268 128 aaKnown RBP11.44□□□□□ -0.58
TFF3-202ENST00000398431 SLC26A3P40879 764 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 TTPAP49638 278 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 CRADDP78560 199 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 ART3Q13508 389 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 TMED2Q15363 201 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.44□□□□□ -0.58
TFF3-202ENST00000398431 AARS2Q5JTZ9 985 aaKnown RBP11.44□□□□□ -0.58
TFF3-202ENST00000398431 SPNS2Q8IVW8 549 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 MCEMP1Q8IX19 187 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 SYCE1Q8N0S2 351 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 SHISA5Q8N114 240 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 AMER3Q8N944 861 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 C1orf54Q8WWF1 131 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 PANX3Q96QZ0 392 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 OR2A5Q96R48 311 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 ZFYVE21Q9BQ24 234 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 PLCD4Q9BRC7 762 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 ACAT2Q9BWD1 397 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 SPATA7Q9P0W8 599 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 ZNF148Q9UQR1 794 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 MRPS2Q9Y399 296 aaKnown RBP11.44□□□□□ -0.58
TFF3-202ENST00000398431 FAM169AQ9Y6X4 670 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 PCNX1Q96RV3 2341 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 CPAMD8Q8IZJ3 1885 aa11.44□□□□□ -0.58
TFF3-202ENST00000398431 CSMD1Q96PZ7 3565 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 FBN2P35556 2912 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 DYTNA2CJ06 578 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 E7EVH7 732 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 KPNA5O15131 536 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 ZSCAN12O43309 604 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 NDUFS3O75489 264 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 WDPCPO95876 746 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 APRTP07741 180 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 ITGAMP11215 1152 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 FBLP22087 321 aaKnown RBP11.43□□□□□ -0.58
TFF3-202ENST00000398431 FDXRP22570 491 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 CMPK1P30085 196 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 CCNFP41002 786 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 SESN2P58004 480 aaPredicted RBP11.43□□□□□ -0.58
TFF3-202ENST00000398431 EEF1A2Q05639 463 aaKnown RBP11.43□□□□□ -0.58
TFF3-202ENST00000398431 SNX1Q13596 522 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 DSG2Q14126 1118 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 PCOLCEQ15113 449 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 SYT16Q17RD7 645 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 HKDC1Q2TB90 917 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 FAAH2Q6GMR7 532 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 ZNF425Q6IV72 752 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 LRRC8BQ6P9F7 803 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 CNSTQ6PJW8 725 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 TMEM205Q6UW68 189 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 SUSD1Q6UWL2 747 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 OTOAQ7RTW8 1153 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 PAQR7Q86WK9 346 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 LRRC6Q86X45 466 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 PPHLN1Q8NEY8 458 aaKnown RBP11.43□□□□□ -0.58
TFF3-202ENST00000398431 OR9A1PQ8NGU1 263 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 IMMP1LQ96LU5 166 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 MAGEB10Q96LZ2 347 aaPredicted RBP11.43□□□□□ -0.58
TFF3-202ENST00000398431 TGIF2Q9GZN2 237 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 TRPC4Q9UBN4 977 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 GNPTGQ9UJJ9 305 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 CDC14AQ9UNH5 594 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 RUVBL1Q9Y265 456 aaKnown RBP11.43□□□□□ -0.58
TFF3-202ENST00000398431 CAPN6Q9Y6Q1 641 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 SCN2AQ99250 2005 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 PKDREJQ9NTG1 2253 aa11.43□□□□□ -0.58
TFF3-202ENST00000398431 OTOGQ6ZRI0 2925 aa11.42□□□□□ -0.58
TFF3-202ENST00000398431 ARHGEF33A8MVX0 844 aa11.42□□□□□ -0.58
TFF3-202ENST00000398431 CTIFO43310 598 aaKnown RBP11.42□□□□□ -0.58
TFF3-202ENST00000398431 NIPSNAP2O75323 286 aa11.42□□□□□ -0.58
TFF3-202ENST00000398431 WFS1O76024 890 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms