RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PLK4O00444 970 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 DLDP09622 509 aaKnown RBP11.06□□□□□ -0.64
TTC28-201ENST00000397906 LRTOMTQ8WZ04 291 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 LENG8Q96PV6 779 aaPredicted RBP11.06□□□□□ -0.64
TTC28-201ENST00000397906 SLC32A1Q9H598 525 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 CDH1P12830 882 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 IFI44LQ53G44 452 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 NLGN4XQ8N0W4 816 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 OR51B5Q9H339 312 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 ITM2CQ9NQX7 267 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 PCDHGB5Q9Y5G0 923 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 DUXAA6NLW8 204 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 TSPAN5P62079 268 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 SNTA1Q13424 505 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 C1orf189Q5VU69 101 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 TTLL10Q6ZVT0 673 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 OR10Q1Q8NGQ4 319 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 SAMD11Q96NU1 681 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 ZNF180Q9UJW8 692 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 SERPINA3P01011 423 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 PXNP49023 591 aaPredicted RBP11.06□□□□□ -0.64
TTC28-201ENST00000397906 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.06□□□□□ -0.649e-6■■■■□ 24.9
TTC28-201ENST00000397906 CDCA2Q69YH5 1023 aaPredicted RBP11.06□□□□□ -0.64
TTC28-201ENST00000397906 SLC35F5Q8WV83 523 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 DLG5Q8TDM6 1919 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 CSN2P05814 226 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 MTHFD1P11586 935 aaKnown RBP11.06□□□□□ -0.64
TTC28-201ENST00000397906 JUNDP17535 347 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 CLCN4P51793 760 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 COL21A1Q96P44 957 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 ZNF446Q9NWS9 450 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 DAPL1A0PJW8 107 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 PBX1P40424 430 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 RPS13P62277 151 aaKnown RBP11.06□□□□□ -0.64
TTC28-201ENST00000397906 TMEM115Q12893 351 aaPredicted RBP11.06□□□□□ -0.64
TTC28-201ENST00000397906 SPIN4Q56A73 249 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 SLC39A4Q6P5W5 647 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 SYVN1Q86TM6 617 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 ZNF761Q86XN6 746 aaPredicted RBP11.06□□□□□ -0.64
TTC28-201ENST00000397906 SLC5A11Q8WWX8 675 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 ZDHHC12Q96GR4 267 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 Q9N2J8 555 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 P2RX2Q9UBL9 471 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 RNGTTO60942 597 aaKnown RBP11.06□□□□□ -0.64
TTC28-201ENST00000397906 COQ9O75208 318 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 ETS2P15036 469 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 USP30Q70CQ3 517 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 LRRC17Q8N6Y2 441 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 GATSQ8NAP1 163 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 CAPSLQ8WWF8 208 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 NSMCE3Q96MG7 304 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 OR1A2Q9Y585 309 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 NR0B1P51843 470 aaKnown RBP11.06□□□□□ -0.64
TTC28-201ENST00000397906 SLCO6A1Q86UG4 719 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 PQLC1Q8N2U9 271 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 SIX2Q9NPC8 291 aa11.06□□□□□ -0.64
TTC28-201ENST00000397906 LMAN2Q12907 356 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 RGS21Q2M5E4 152 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 ZSWIM3Q96MP5 696 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 TFB2MQ9H5Q4 396 aaKnown RBP11.05□□□□□ -0.64
TTC28-201ENST00000397906 TMEM233B4DJY2 109 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 MTRF1O75570 445 aaKnown RBP11.05□□□□□ -0.64
TTC28-201ENST00000397906 KCNE1P15382 129 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 C12orf40Q86WS4 652 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 LRRC57Q8N9N7 239 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 B4GALT6Q9UBX8 382 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 A0A1B0GVT2 93 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 CAPN8A6NHC0 703 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 GPRC6AQ5T6X5 926 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 PTX3P26022 381 aaPredicted RBP11.05□□□□□ -0.64
TTC28-201ENST00000397906 DSTNP60981 165 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 GPR153Q6NV75 609 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 ERN2Q76MJ5 926 aaKnown RBP11.05□□□□□ -0.64
TTC28-201ENST00000397906 LINGO2Q7L985 606 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 KLHL6Q8WZ60 621 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 CHCHD6Q9BRQ6 235 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 CCDC28BQ9BUN5 200 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 GATA5Q9BWX5 397 aaPredicted RBP11.05□□□□□ -0.64
TTC28-201ENST00000397906 TBC1D24Q9ULP9 559 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 ANGPTL1O95841 491 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 RPS6KA3P51812 740 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 RALGPS1Q5JS13 557 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 COPS4Q9BT78 406 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 IGLON5A6NGN9 336 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 PGAM2P15259 253 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 SEMA3AQ14563 771 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 PDSS1Q5T2R2 415 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 OR52E4Q8NGH9 312 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 RSL24D1Q9UHA3 163 aaKnown RBP11.05□□□□□ -0.64
TTC28-201ENST00000397906 CPNE6O95741 557 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 DUSP3P51452 185 aaPredicted RBP11.05□□□□□ -0.64
TTC28-201ENST00000397906 ZNF805Q5CZA5 627 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 FRG2Q64ET8 278 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 FBXO46Q6PJ61 603 aaPredicted RBP11.05□□□□□ -0.64
TTC28-201ENST00000397906 CEP97Q8IW35 865 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 FRG2BQ96QU4 278 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 A0A1W2PPL8 197 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 AVL9Q8NBF6 648 aa11.05□□□□□ -0.64
TTC28-201ENST00000397906 TOP1MTQ969P6 601 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms