RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SYVN1Q86TM6 617 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 PHACTR4Q8IZ21 702 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 CLYBLQ8N0X4 340 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 OR52B6Q8NGF0 335 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 GPBAR1Q8TDU6 330 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 ZNF480Q8WV37 535 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 ZNF382Q96SR6 550 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 NPAS2Q99743 824 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 SPAG4Q9NPE6 437 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 WASH6PQ9NQA3 447 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 SCHIP1Q9P0W5 487 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 SLC22A14Q9Y267 594 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 CACNA1IQ9P0X4 2223 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 PLXND1Q9Y4D7 1925 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 C15orf38-AP3S2A0A0A6YYH1 394 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 ESRRBO95718 433 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 CTSEP14091 401 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 ITPKAP23677 461 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 ARL1P40616 181 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 GRB7Q14451 532 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 KRT33BQ14525 404 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 RPE65Q16518 533 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 CLEC6AQ6EIG7 209 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 C8orf82Q6P1X6 216 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 GPRIN3Q6ZVF9 776 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 LARP4Q71RC2 724 aaKnown RBP eCLIP18.7■□□□□ 0.586e-7■■□□□ 13.2
PDLIM2-204ENST00000397760 ARPINQ7Z6K5 226 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 SYTL1Q8IYJ3 562 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 SNX31Q8N9S9 440 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 GAB3Q8WWW8 586 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 ROPN1LQ96C74 230 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 MED8Q96G25 268 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 GSDMCQ9BYG8 508 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 DNAJC11Q9NVH1 559 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 ZNF225Q9UK10 706 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 PCOLCE2Q9UKZ9 415 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 PLAGL1Q9UM63 463 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 COMMD3-BMI1R4GMX3 469 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 ANKRD12Q6UB98 2062 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 AZIN1O14977 448 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 BCAT2O15382 392 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 KATNA1O75449 491 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 EML2O95834 649 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 OTCP00480 354 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 JUNDP17535 347 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 CSNK1EP49674 416 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 RHDQ02161 417 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 TLR1Q15399 786 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 THEMIS2Q5TEJ8 643 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 GK5Q6ZS86 529 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 C11orf74Q86VG3 221 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 OR56A3Q8NH54 315 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 MARK4Q96L34 752 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 CDK15Q96Q40 435 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 TRIM4Q9C037 500 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 FBXO4Q9UKT5 387 aa18.69■□□□□ 0.58
PDLIM2-204ENST00000397760 ABCA7Q8IZY2 2146 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 TXNDC9O14530 226 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 CRCPO75575 148 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 OR4F21O95013 312 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 DHPSP49366 369 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 FOXA1P55317 472 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 ERVPABLB-1P60509 514 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 DYNC1I2Q13409 638 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 SPATS1Q496A3 300 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 SAMD4BQ5PRF9 694 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 LYSMD4Q5XG99 296 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 FAM219BQ5XKK7 198 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 REP15Q6BDI9 236 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 MILR1Q7Z6M3 343 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 THOC6Q86W42 341 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 KLHDC8AQ8IYD2 350 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 FBXL6Q8N531 539 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 DCBLD1Q8N8Z6 715 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 TMEM102Q8N9M5 508 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 HMGCLL1Q8TB92 370 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 IL17FQ96PD4 163 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 KCNA7Q96RP8 456 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 MVB12BQ9H7P6 319 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 ZNF696Q9H7X3 374 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 COPS7BQ9H9Q2 264 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 VCX3AQ9NNX9 186 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 INTS7Q9NVH2 962 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 ADA2Q9NZK5 511 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 CD300AQ9UGN4 299 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 APOBEC3BQ9UH17 382 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 PADI4Q9UM07 663 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 HEBP2Q9Y5Z4 205 aa18.68■□□□□ 0.58
PDLIM2-204ENST00000397760 VILLO15195 856 aa18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 TNFAIP8O95379 198 aa18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 CSF2P04141 144 aa18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 MTHFD1P11586 935 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 EPORP19235 508 aa18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 GSTT1P30711 240 aa18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 AFF3P51826 1226 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 PNLIPRP1P54315 467 aa18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 NXPH1P58417 271 aa18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 STX1BP61266 288 aa18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 TRAF3Q13114 568 aa18.67■□□□□ 0.58
PDLIM2-204ENST00000397760 CNPY1Q3B7I2 92 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms