RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 DLGAP2Q9P1A6 1054 aa14.95□□□□□ -0.02
LSS-202ENST00000397728 KNTC1P50748 2209 aa14.95□□□□□ -0.02
LSS-202ENST00000397728 COL4A1P02462 1669 aa14.95□□□□□ -0.02
LSS-202ENST00000397728 LINC01565O15544 149 aa14.95□□□□□ -0.02
LSS-202ENST00000397728 PSMB9P28065 219 aa14.95□□□□□ -0.02
LSS-202ENST00000397728 TPP2P29144 1249 aaPredicted RBP14.95□□□□□ -0.02
LSS-202ENST00000397728 SMAD4Q13485 552 aaKnown RBP14.95□□□□□ -0.02
LSS-202ENST00000397728 PCBP2Q15366 365 aaKnown RBP eCLIP14.95□□□□□ -0.021e-6■■■□□ 15.2
LSS-202ENST00000397728 CCSAPQ6IQ19 270 aaPredicted RBP14.95□□□□□ -0.02
LSS-202ENST00000397728 SLC29A4Q7RTT9 530 aa14.95□□□□□ -0.02
LSS-202ENST00000397728 ULK2Q8IYT8 1036 aa14.95□□□□□ -0.02
LSS-202ENST00000397728 ZNF689Q96CS4 500 aaPredicted RBP14.95□□□□□ -0.02
LSS-202ENST00000397728 TEFMQ96QE5 360 aaKnown RBP14.95□□□□□ -0.02
LSS-202ENST00000397728 EBF4Q9BQW3 602 aa14.95□□□□□ -0.02
LSS-202ENST00000397728 AKTIPQ9H8T0 292 aa14.95□□□□□ -0.02
LSS-202ENST00000397728 PCDHGA2Q9Y5H1 932 aa14.95□□□□□ -0.02
LSS-202ENST00000397728 HHLA1C9JL84 531 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 CDKN1CP49918 316 aaPredicted RBP14.94□□□□□ -0.02
LSS-202ENST00000397728 SRP54P61011 504 aaKnown RBP14.94□□□□□ -0.02
LSS-202ENST00000397728 ZNF730Q6ZMV8 503 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 OR5AK3PQ8NH89 298 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 SLC47A1Q96FL8 570 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 ZSWIM3Q96MP5 696 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 SLC38A2Q96QD8 506 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 CA5BQ9Y2D0 317 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 PSMD11O00231 422 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 RGS5O15539 181 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 RBMS1P29558 406 aaKnown RBP14.94□□□□□ -0.02
LSS-202ENST00000397728 FOXN2P32314 431 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 ADGRG6Q86SQ4 1221 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 PROSER1Q86XN7 944 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 SMIM14Q96QK8 99 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 KCNA7Q96RP8 456 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 MYADMQ96S97 322 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 C19orf25Q9UFG5 118 aaPredicted RBP14.94□□□□□ -0.02
LSS-202ENST00000397728 DOCK1Q14185 1865 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 CACNG3O60359 315 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 SGSHP51688 502 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 TBPL1P62380 186 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 KCNJ2P63252 427 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 KCNC3Q14003 757 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 DEFB134Q4QY38 66 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 SLC9B1Q4ZJI4 515 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 DPPA4Q7L190 304 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 UHRF1Q96T88 793 aaPredicted RBP14.94□□□□□ -0.02
LSS-202ENST00000397728 ZNF395Q9H8N7 513 aaPredicted RBP14.94□□□□□ -0.02
LSS-202ENST00000397728 ZNF282Q9UDV7 671 aaPredicted RBP14.94□□□□□ -0.02
LSS-202ENST00000397728 OR52A4PA6NMU1 304 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 KHNYNO15037 678 aaKnown RBP14.94□□□□□ -0.02
LSS-202ENST00000397728 CRISPLD2Q9H0B8 497 aa14.94□□□□□ -0.02
LSS-202ENST00000397728 LAMB1P07942 1786 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 AURKAO14965 403 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 IFNW1P05000 195 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 MPC1LP0DKB6 136 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 SPPL2CQ8IUH8 684 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 OR2A12Q8NGT7 310 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 TAPBPLQ9BX59 468 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 ENTPD5O75356 428 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 PSMG1O95456 288 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 REP15Q6BDI9 236 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 TICAM1Q8IUC6 712 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 GJD3Q8N144 294 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 C3orf18Q9UK00 162 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 DUXAA6NLW8 204 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 STX16-NPEPL1H3BU86 382 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 STX16O14662 325 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 MYL12BO14950 172 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 DCNP07585 359 aaKnown RBP14.93□□□□□ -0.02
LSS-202ENST00000397728 HEXBP07686 556 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 ALOX5P09917 674 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 HNRNPH1P31943 449 aaKnown RBP14.93□□□□□ -0.02
LSS-202ENST00000397728 KHKP50053 298 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 MTPNP58546 118 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 KLHL12Q53G59 568 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 OR4F3Q6IEY1 312 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 KDELC1Q6UW63 502 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 PLA2G15Q8NCC3 412 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 TEX47Q8TBZ9 253 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 PTCHD1Q96NR3 888 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 CD248Q9HCU0 757 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 PRSS16Q9NQE7 514 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 OBP2AQ9NY56 170 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 ZDHHC2Q9UIJ5 367 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 RARRES3Q9UL19 164 aa14.93□□□□□ -0.02
LSS-202ENST00000397728 COL11A2P13942 1736 aaPredicted RBP14.93□□□□□ -0.02
LSS-202ENST00000397728 PROS1P07225 676 aa14.92□□□□□ -0.02
LSS-202ENST00000397728 C1GALT1C1LP0DN25 315 aa14.92□□□□□ -0.02
LSS-202ENST00000397728 TCF3P15923 654 aa14.92□□□□□ -0.02
LSS-202ENST00000397728 YAP1P46937 504 aaKnown RBP14.92□□□□□ -0.02
LSS-202ENST00000397728 CSNK1EP49674 416 aaKnown RBP14.92□□□□□ -0.02
LSS-202ENST00000397728 RAB28P51157 221 aa14.92□□□□□ -0.02
LSS-202ENST00000397728 CDKN2DP55273 166 aa14.92□□□□□ -0.02
LSS-202ENST00000397728 FAM109BQ6ICB4 259 aaPredicted RBP14.92□□□□□ -0.02
LSS-202ENST00000397728 NET1Q7Z628 596 aaPredicted RBP14.92□□□□□ -0.02
LSS-202ENST00000397728 ASPGQ86U10 573 aa14.92□□□□□ -0.02
LSS-202ENST00000397728 RBM15BQ8NDT2 890 aaKnown RBP14.92□□□□□ -0.02
LSS-202ENST00000397728 OR5M3Q8NGP4 307 aa14.92□□□□□ -0.02
LSS-202ENST00000397728 DTD2Q96FN9 168 aa14.92□□□□□ -0.02
LSS-202ENST00000397728 CFHR5Q9BXR6 569 aa14.92□□□□□ -0.02
LSS-202ENST00000397728 PRDM8Q9NQV8 689 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms