RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 TBC1D3DA0A087WVF3 549 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TBC1D3IA0A087WXS9 549 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TBC1D3EA0A087X179 549 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TBC1D3KA0A087X1G2 549 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TBC1D3FA6NER0 549 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TBC1D3LB9A6J9 549 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 G3V2L1 256 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 ACOX3O15254 700 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 CH25HO95992 272 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TBC1D3HP0C7X1 549 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 PSKH1P11801 424 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 SELPP16109 830 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 PTNP21246 168 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 SH3BP2P78314 561 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 CD83Q01151 205 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 SLBPQ14493 270 aaKnown RBP eCLIP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TSTQ16762 297 aaKnown RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TBC1D3GQ6DHY5 549 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TBC1D3CQ6IPX1 549 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 KLHL35Q6PF15 583 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 KRT77Q7Z794 578 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 SYVN1Q86TM6 617 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 TBC1D3Q8IZP1 549 aaPredicted RBP10.48□□□□□ -0.73
CCDC40-204ENST00000397545 DNASE1L2Q92874 299 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 PYURFQ96I23 114 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 PDCD10Q9BUL8 212 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 VRTNQ9H8Y1 702 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 MKS1Q9NXB0 559 aa10.48□□□□□ -0.73
CCDC40-204ENST00000397545 A0A0U1RQF3 1178 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 FAM86C2PA6NEL3 165 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 GRID2O43424 1007 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 HIST1H2ABP04908 130 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 SDC2P34741 201 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 TIE1P35590 1138 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ACADVLP49748 655 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 PPP2R2BQ00005 443 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 GK3PQ14409 553 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 RFTN2Q52LD8 501 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 C6orf141Q5SZD1 244 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ASB18Q6ZVZ8 466 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 HIST3H2AQ7L7L0 130 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 CMTR2Q8IYT2 770 aaKnown RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 CADM2Q8N3J6 435 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 TMEM199Q8N511 208 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 POF1BQ8WVV4 589 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 HIST1H2ACQ93077 130 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 HSH2DQ96JZ2 352 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 SUSD3Q96L08 255 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 SLC35A5Q9BS91 424 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 YTHDF1Q9BYJ9 559 aaKnown RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 DERL2Q9GZP9 239 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 OR51B5Q9H339 312 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 TRIT1Q9H3H1 467 aaKnown RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 PRDM8Q9NQV8 689 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 DEC1Q9P2X7 70 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 NME7Q9Y5B8 376 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 CENPFP49454 3210 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 A0A1W2PRU2 124 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 MANBAO00462 879 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 GNB5O14775 395 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 S1PR4O95977 384 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 EPHX1P07099 455 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 C8GP07360 202 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 CHRM1P11229 460 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 CSTF2P33240 577 aaKnown RBP eCLIP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 DNAJB13P59910 316 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 SCARB2Q14108 478 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 DNAJB7Q7Z6W7 309 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 PHYKPLQ8IUZ5 450 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 CMTM8Q8IZV2 173 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ACVR1CQ8NER5 493 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 OR10H4Q8NGA5 316 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF296Q8WUU4 475 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 LRCH3Q96II8 777 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 WDR83Q9BRX9 315 aaKnown RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 TRMT61BQ9BVS5 477 aaKnown RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 MED28Q9H204 178 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 TIGARQ9NQ88 270 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 A0A0U1RQS6 177 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 TPD52L2O43399 206 aaKnown RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 APOL3O95236 402 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ACRP10323 421 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 IL4RP24394 825 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 PSMA3P25788 255 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ITPKBP27987 946 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 SLC15A1P46059 708 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 EMX2Q04743 252 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 HEPACAMQ14CZ8 416 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ATP13A5Q4VNC0 1218 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 MBOAT1Q6ZNC8 495 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 Q6ZVU0 165 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 USP43Q70EL4 1123 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 EGFL6Q8IUX8 553 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 KCT2Q8NC54 265 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 PIGKQ92643 395 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ZUFSPQ96AP4 578 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 SLC45A3Q96JT2 553 aa10.47□□□□□ -0.73
CCDC40-204ENST00000397545 ZNF641Q96N77 438 aaPredicted RBP10.47□□□□□ -0.73
CCDC40-204ENST00000397545 SORT1Q99523 831 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms