RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 RNF186Q9NXI6 227 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PRKAG2Q9UGJ0 569 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ZNF639Q9UID6 485 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GPR45Q9Y5Y3 372 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PATJQ8NI35 1801 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PTPRDP23468 1912 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SCN10AQ9Y5Y9 1956 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PNMA8CA0A1B0GUJ8 204 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 A0A1W2PP18 115 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PTGES3LE9PB15 166 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ARVCFO00192 962 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 COCHO43405 550 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SEMA3DO95025 777 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 UMPSP11172 480 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 IFI30P13284 250 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PKMP14618 531 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 TYMPP19971 482 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PCMT1P22061 227 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TALDO1P37837 337 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SLC11A1P49279 550 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ALDH3A2P51648 485 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 MAPK12P53778 367 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 CCL23P55773 120 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 NCS1P62166 190 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 STARD3Q14849 445 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 CPSF6Q16630 551 aaKnown RBP eCLIP4.89□□□□□ -1.633e-9■■□□□ 12.8
SSR1-202ENST00000397511 DPY19L1Q2PZI1 675 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 AP5B1Q2VPB7 878 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GTDC1Q4AE62 458 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PTRHD1Q6GMV3 140 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 DPY19L3Q6ZPD9 716 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 Q6ZSR9 355 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GPRIN3Q6ZVF9 776 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 DET1Q7L5Y6 550 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 VN1R5Q7Z5H4 357 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TEX26Q8N6G2 289 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 KRTCAP2Q8N6L1 136 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TP53I13Q8NBR0 393 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 CHDHQ8NE62 594 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 FLCNQ8NFG4 579 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 OR4F6Q8NGB9 312 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 OR10A6Q8NH74 314 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ADAMTS19Q8TE59 1207 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 KIAA1191Q96A73 305 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TMEM125Q96AQ2 219 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SH3KBP1Q96B97 665 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 BIRC7Q96CA5 298 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 EID2BQ96D98 161 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 YIPF6Q96EC8 236 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TMEM80Q96HE8 168 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 RNF170Q96K19 258 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ZNF300Q96RE9 604 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 SLC22A12Q96S37 553 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SERINC2Q96SA4 455 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GDF15Q99988 308 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 HOPXQ9BPY8 73 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 TRMOQ9BU70 441 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 BTBD2Q9BX70 525 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ALOXE3Q9BYJ1 711 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 MUC13Q9H3R2 512 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 IPPKQ9H8X2 491 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SMURF2Q9HAU4 748 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ZNF69Q9UC07 566 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 OSGIN1Q9UJX0 560 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 STOML2Q9UJZ1 356 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PCTPQ9UKL6 214 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PCDHB3Q9Y5E6 796 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 VWA8A3KMH1 1905 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ANKRD36A6QL64 1941 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PIKFYVEQ9Y2I7 2098 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 TANC1Q9C0D5 1861 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 PABPN1LA6NDY0 278 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 BBIP1A8MTZ0 92 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 LEUTXA8MZ59 168 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 E2F3O00716 465 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 GNGT2O14610 69 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 CAPN5O15484 640 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 DFNA5O60443 496 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ACSL4O60488 711 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 NBNO60934 754 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 MTX2O75431 263 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 WISP3O95389 354 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 PDGFAP04085 211 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ICAM2P13598 275 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 HSD17B1P14061 328 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 LPOP22079 712 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 PSMB9P28065 219 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ERP29P30040 261 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 ACLYP53396 1101 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ARSFP54793 590 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 PRKCDQ05655 676 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 FPGSQ05932 587 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ZNF177Q13360 481 aaPredicted RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 SNTA1Q13424 505 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 DAG1Q14118 895 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 ARHGEF7Q14155 803 aa4.89□□□□□ -1.63
SSR1-202ENST00000397511 SF1Q15637 639 aaKnown RBP4.89□□□□□ -1.63
SSR1-202ENST00000397511 SLC14A2Q15849 920 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms