RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 PNCKQ6P2M8 343 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 DOK6Q6PKX4 331 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 SLCO4C1Q6ZQN7 724 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 PDZD3Q86UT5 571 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 GPR180Q86V85 440 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 EPHX4Q8IUS5 362 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 CHERPQ8IWX8 916 aaKnown RBP14.46□□□□□ -0.09
CBX3-202ENST00000396386 CHPFQ8IZ52 775 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 OR10A6Q8NH74 314 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 NEIL2Q969S2 332 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 GBP5Q96PP8 586 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 SLC29A1Q99808 456 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 SGPP1Q9BX95 441 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 PRM3Q9NNZ6 103 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 UBAP1Q9NZ09 502 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 V9GYQ6 96 aa14.46□□□□□ -0.09
CBX3-202ENST00000396386 IGLON5A6NGN9 336 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 RFXAPO00287 272 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 HOXB9P17482 250 aaPredicted RBP14.46□□□□□ -0.1
CBX3-202ENST00000396386 ACADLP28330 430 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 C21orf58P58505 322 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 TAS2R38P59533 333 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 CDK3Q00526 305 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 RPA4Q13156 261 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 CAMK2GQ13555 558 aaPredicted RBP14.46□□□□□ -0.1
CBX3-202ENST00000396386 TSTA3Q13630 321 aaPredicted RBP14.46□□□□□ -0.1
CBX3-202ENST00000396386 SPIN4Q56A73 249 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 ATAT1Q5SQI0 421 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 TMTC4Q5T4D3 741 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 C10orf62Q5T681 223 aaPredicted RBP14.46□□□□□ -0.1
CBX3-202ENST00000396386 PARM1Q6UWI2 310 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 FAM83HQ6ZRV2 1179 aaPredicted RBP14.46□□□□□ -0.1
CBX3-202ENST00000396386 C11orf96Q7Z7L8 435 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 LRRTM4Q86VH4 590 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 ZNF513Q8N8E2 541 aaPredicted RBP14.46□□□□□ -0.1
CBX3-202ENST00000396386 OR7G3Q8NG95 312 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 FIG4Q92562 907 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 WDR34Q96EX3 536 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 SEPHS2Q99611 448 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 INPP5KQ9BT40 448 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 EFCAB11Q9BUY7 163 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 OR52A5Q9H2C5 316 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 CCDC177Q9NQR7 707 aaPredicted RBP14.46□□□□□ -0.1
CBX3-202ENST00000396386 INVSQ9Y283 1065 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 TMEM98Q9Y2Y6 226 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 PCDHB14Q9Y5E9 798 aa14.46□□□□□ -0.1
CBX3-202ENST00000396386 ELOVL7A1L3X0 281 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 MAGEB17A8MXT2 336 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 PCDH8O95206 1070 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 TNFAIP8O95379 198 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 LDLRP01130 860 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 C5AR1P21730 350 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 SRSF11Q05519 484 aaKnown RBP14.45□□□□□ -0.1
CBX3-202ENST00000396386 SLBPQ14493 270 aaKnown RBP eCLIP14.45□□□□□ -0.1
CBX3-202ENST00000396386 FAM98BQ52LJ0 330 aaKnown RBP14.45□□□□□ -0.1
CBX3-202ENST00000396386 PAGE2BQ5JRK9 111 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 OR4F3Q6IEY1 312 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 CES5AQ6NT32 575 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.45□□□□□ -0.1
CBX3-202ENST00000396386 ANKRD46Q86W74 232 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 MICU2Q8IYU8 434 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 CBR4Q8N4T8 237 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 OXR1Q8N573 874 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 MFSD2AQ8NA29 543 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 HUS1BQ8NHY5 278 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 CDC26Q8NHZ8 85 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 FGF14Q92915 247 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 GFM2Q969S9 779 aaKnown RBP14.45□□□□□ -0.1
CBX3-202ENST00000396386 EGLN2Q96KS0 407 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 RNF145Q96MT1 663 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 TRMT61BQ9BVS5 477 aaKnown RBP14.45□□□□□ -0.1
CBX3-202ENST00000396386 ZDHHC5Q9C0B5 715 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 EHD1Q9H4M9 534 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 GORASP2Q9H8Y8 452 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 SLC6A13Q9NSD5 602 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 MAPRE3Q9UPY8 281 aa14.45□□□□□ -0.1
CBX3-202ENST00000396386 ARHGAP10A1A4S6 786 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 RFXANKO14593 260 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 SCELO95171 688 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 FAM58BPP0C7Q3 252 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 RAP2AP10114 183 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 LAMP2P13473 410 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 COX7A2P14406 83 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 ASMTP46597 345 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 TXNL4AP83876 142 aaKnown RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 UGT8Q16880 541 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 WSCD2Q2TBF2 565 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 ZNF776Q68DI1 518 aaPredicted RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 ADNP2Q6IQ32 1131 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 SPRED1Q7Z699 444 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 AMZ2Q86W34 360 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 CALHM3Q86XJ0 350 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 DCUN1D3Q8IWE4 304 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 C1orf52Q8N6N3 182 aaKnown RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 SLC5A11Q8WWX8 675 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 FAM120BQ96EK7 910 aaKnown RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 CENPKQ9BS16 269 aa14.44□□□□□ -0.1
CBX3-202ENST00000396386 REXO4Q9GZR2 422 aaKnown RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 KAT8Q9H7Z6 458 aaKnown RBP14.44□□□□□ -0.1
CBX3-202ENST00000396386 FAM120CQ9NX05 1096 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms