RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PLD3Q8IV08 490 aa19.1■□□□□ 0.65
SNCA-203ENST00000394986 SLC38A9Q8NBW4 561 aa19.1■□□□□ 0.65
SNCA-203ENST00000394986 OR8K5Q8NH50 307 aa19.1■□□□□ 0.65
SNCA-203ENST00000394986 OR2W6PQ8NHA6 318 aa19.1■□□□□ 0.65
SNCA-203ENST00000394986 NKD1Q969G9 470 aa19.1■□□□□ 0.65
SNCA-203ENST00000394986 RHBDF1Q96CC6 855 aa19.1■□□□□ 0.65
SNCA-203ENST00000394986 PRAP1Q96NZ9 151 aa19.1■□□□□ 0.65
SNCA-203ENST00000394986 TMEM79Q9BSE2 394 aa19.1■□□□□ 0.65
SNCA-203ENST00000394986 IRAK4Q9NWZ3 460 aa19.1■□□□□ 0.65
SNCA-203ENST00000394986 ZZEF1O43149 2961 aa19.1■□□□□ 0.65
SNCA-203ENST00000394986 LAMA5O15230 3695 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 A0A087WV48 116 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 HAT1O14929 419 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 OR2B3O76000 313 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 KLHL2O95198 593 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 CDH1P12830 882 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 NPPBP16860 134 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 ABATP80404 500 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 FAM83EQ2M2I3 478 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 LCTLQ6UWM7 567 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 LRRC69Q6ZNQ3 347 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 RNF44Q7L0R7 432 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 CCDC91Q7Z6B0 441 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 C17orf64Q86WR6 236 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 CACNA2D3Q8IZS8 1091 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 NLGN4XQ8N0W4 816 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 NLGN4YQ8NFZ3 816 aaPredicted RBP19.09■□□□□ 0.65
SNCA-203ENST00000394986 EPS8L3Q8TE67 593 aaKnown RBP19.09■□□□□ 0.65
SNCA-203ENST00000394986 ESAMQ96AP7 390 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 TSNARE1Q96NA8 513 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 GPR78Q96P69 363 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 ATOH8Q96SQ7 321 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 SELENOSQ9BQE4 189 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 CCDC77Q9BR77 488 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 STARD5Q9NSY2 213 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 CD274Q9NZQ7 290 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 FETUBQ9UGM5 382 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 SERTAD3Q9UJW9 196 aa19.09■□□□□ 0.65
SNCA-203ENST00000394986 FOXO6A8MYZ6 492 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 SUPT3HB4E1H0 165 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 E7EQ34 232 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 UBXN8O00124 270 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 TAPBPO15533 448 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 ZNF749O43361 778 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 KERAO60938 352 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 SUPT3HO75486 399 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 RFPL1O75677 317 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 CCND1P24385 295 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 TLE3Q04726 772 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 ZC3H12BQ5HYM0 836 aaKnown RBP19.08■□□□□ 0.65
SNCA-203ENST00000394986 LGSNQ5TDP6 509 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 FBXO42Q6P3S6 717 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 C6orf15Q6UXA7 325 aaPredicted RBP19.08■□□□□ 0.65
SNCA-203ENST00000394986 THOC6Q86W42 341 aaKnown RBP19.08■□□□□ 0.65
SNCA-203ENST00000394986 GPR135Q8IZ08 494 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 ZNF655Q8N720 491 aaPredicted RBP19.08■□□□□ 0.65
SNCA-203ENST00000394986 STAG3L4Q8TBR4 150 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 HNRNPLLQ8WVV9 542 aaKnown RBP19.08■□□□□ 0.65
SNCA-203ENST00000394986 CAVIN3Q969G5 261 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 ZFYVE21Q9BQ24 234 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 PCBD2Q9H0N5 130 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 AKIRIN1Q9H9L7 192 aaPredicted RBP19.08■□□□□ 0.65
SNCA-203ENST00000394986 RRAGDQ9NQL2 400 aaPredicted RBP19.08■□□□□ 0.65
SNCA-203ENST00000394986 PCMTD2Q9NV79 361 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 WWOXQ9NZC7 414 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 ANKMY1Q9P2S6 941 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 RAB21Q9UL25 225 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 SLC22A14Q9Y267 594 aa19.08■□□□□ 0.65
SNCA-203ENST00000394986 LOC105369274A0A096LPK9 316 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 LOC102723532A0A0G2JNH3 316 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 ZSCAN9O15535 394 aaPredicted RBP19.08■□□□□ 0.64
SNCA-203ENST00000394986 CPNE3O75131 537 aaKnown RBP19.08■□□□□ 0.64
SNCA-203ENST00000394986 SLC6A12P48065 614 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 HNMTP50135 292 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 VSX2P58304 361 aaPredicted RBP19.08■□□□□ 0.64
SNCA-203ENST00000394986 GPS2Q13227 327 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 NAA25Q14CX7 972 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 OR4N4Q8N0Y3 316 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 IL22RA1Q8N6P7 574 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 PDPRQ8NCN5 879 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 MZB1Q8WU39 189 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 DPH1Q9BZG8 443 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 ACTR5Q9H9F9 607 aaPredicted RBP19.08■□□□□ 0.64
SNCA-203ENST00000394986 SNX7Q9UNH6 387 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 ASB1Q9Y576 335 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 PCDHB3Q9Y5E6 796 aa19.08■□□□□ 0.64
SNCA-203ENST00000394986 URB1O60287 2271 aaKnown RBP19.08■□□□□ 0.64
SNCA-203ENST00000394986 IQANK1A0A1B0GTG1 560 aa19.07■□□□□ 0.64
SNCA-203ENST00000394986 WDR47O94967 919 aa19.07■□□□□ 0.64
SNCA-203ENST00000394986 ATXN8OSP0DMR3 200 aa19.07■□□□□ 0.64
SNCA-203ENST00000394986 HSPA7P48741 367 aa19.07■□□□□ 0.64
SNCA-203ENST00000394986 ATP1A2P50993 1020 aa19.07■□□□□ 0.64
SNCA-203ENST00000394986 CSNK1G2P78368 415 aa19.07■□□□□ 0.64
SNCA-203ENST00000394986 MEF2AQ02078 507 aaPredicted RBP19.07■□□□□ 0.64
SNCA-203ENST00000394986 ACAP2Q15057 778 aa19.07■□□□□ 0.64
SNCA-203ENST00000394986 CATSPEREQ5SY80 951 aa19.07■□□□□ 0.64
SNCA-203ENST00000394986 FAM199XQ6PEV8 388 aaPredicted RBP19.07■□□□□ 0.64
SNCA-203ENST00000394986 C19orf48Q6RUI8 117 aa19.07■□□□□ 0.64
SNCA-203ENST00000394986 TIFABQ6ZNK6 161 aa19.07■□□□□ 0.64
SNCA-203ENST00000394986 ESX1Q8N693 406 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms