RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TACR1P25103 407 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 DCKP27707 260 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 MRPL28Q13084 256 aaKnown RBP12.86□□□□□ -0.35
NFKB1-202ENST00000394820 NAE1Q13564 534 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 PCBP2Q15366 365 aaKnown RBP eCLIP12.86□□□□□ -0.354e-6■■■□□ 18.9
NFKB1-202ENST00000394820 IER5LQ5T953 404 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 ARMC5Q96C12 935 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 SLC39A13Q96H72 371 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 HSH2DQ96JZ2 352 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 C8orf48Q96LL4 319 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 ATOH8Q96SQ7 321 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 YME1L1Q96TA2 773 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 ZFYVE1Q9HBF4 777 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 TBC1D14Q9P2M4 693 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 ATP6V1HQ9UI12 483 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 SLC13A4Q9UKG4 626 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 A0A1W2PQ45 241 aaPredicted RBP12.86□□□□□ -0.35
NFKB1-202ENST00000394820 A0A1W2PQY0 241 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 EOMESO95936 686 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 TSPAN19P0C672 248 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 RCAN2Q14206 197 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 CATSPEREQ5SY80 951 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 DCP2Q8IU60 420 aaKnown RBP12.86□□□□□ -0.35
NFKB1-202ENST00000394820 TRNT1Q96Q11 434 aaKnown RBP12.86□□□□□ -0.35
NFKB1-202ENST00000394820 DSN1Q9H410 356 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 RAD18Q9NS91 495 aa12.86□□□□□ -0.35
NFKB1-202ENST00000394820 H3BM21 787 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 CTDSP2O14595 271 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 INHAP05111 366 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 IL6P05231 212 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 FDXRP22570 491 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 EMX2Q04743 252 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 KANK2Q63ZY3 851 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 TMEM179BQ7Z7N9 219 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 ADGRG2Q8IZP9 1017 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 CELF2-AS1Q8N7Q2 184 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 BEND7Q8N7W2 519 aaPredicted RBP12.85□□□□□ -0.35
NFKB1-202ENST00000394820 ZNF366Q8N895 744 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 HDAC2Q92769 488 aaKnown RBP12.85□□□□□ -0.35
NFKB1-202ENST00000394820 WBP2Q969T9 261 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 ISL2Q96A47 359 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 DIRAS2Q96HU8 199 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 FUBP3Q96I24 572 aaKnown RBP eCLIP12.85□□□□□ -0.35
NFKB1-202ENST00000394820 COMMD3Q9UBI1 195 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 ACSL6Q9UKU0 697 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 ANKRD66B4E2M5 251 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 ACOX3O15254 700 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 ATXN1LP0C7T5 689 aaKnown RBP12.85□□□□□ -0.35
NFKB1-202ENST00000394820 BCKDHAP12694 445 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 NFE2L1Q14494 772 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 PARP15Q460N3 678 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 PLEKHG7Q6ZR37 379 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 CEP68Q76N32 757 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 ZFAND4Q86XD8 727 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 PIH1D2Q8WWB5 315 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 PYURFQ96I23 114 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 HMX1Q9NP08 348 aaPredicted RBP12.85□□□□□ -0.35
NFKB1-202ENST00000394820 MIEF1Q9NQG6 463 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 PAQR5Q9NXK6 330 aaPredicted RBP12.85□□□□□ -0.35
NFKB1-202ENST00000394820 TMEM9Q9P0T7 183 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 TMCC3Q9ULS5 477 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 RNF6Q9Y252 685 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 SLC22A1O15245 554 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 SERPINI2O75830 405 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 PEX11BO96011 259 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 ALOX5P09917 674 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 BMP1P13497 986 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 HTR1EP28566 365 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 MEF2AQ02078 507 aaPredicted RBP12.85□□□□□ -0.35
NFKB1-202ENST00000394820 CREMQ03060 361 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 MAD2L1Q13257 205 aaPredicted RBP12.85□□□□□ -0.35
NFKB1-202ENST00000394820 LRRC49Q8IUZ0 686 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 C19orf18Q8NEA5 215 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 MYLIPQ8WY64 445 aa12.85□□□□□ -0.35
NFKB1-202ENST00000394820 ZNF641Q96N77 438 aaPredicted RBP12.85□□□□□ -0.35
NFKB1-202ENST00000394820 NOTOA8MTQ0 251 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 COCHO43405 550 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 PRAMEF11O60813 436 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 UGT2B11O75310 529 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 EEDO75530 441 aaKnown RBP12.84□□□□□ -0.35
NFKB1-202ENST00000394820 SCELO95171 688 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 CLDN9O95484 217 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 GPC1P35052 558 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 GSTM4Q03013 218 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 NEK5Q6P3R8 708 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 TNFAIP8L2Q6P589 184 aaPredicted RBP12.84□□□□□ -0.35
NFKB1-202ENST00000394820 ARL14EPQ8N8R7 260 aaPredicted RBP12.84□□□□□ -0.35
NFKB1-202ENST00000394820 MDGA1Q8NFP4 955 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 PCNPQ8WW12 178 aaKnown RBP12.84□□□□□ -0.35
NFKB1-202ENST00000394820 C1orf74Q96LT6 269 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 ZNF583Q96ND8 569 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 DNAJC27Q9NZQ0 273 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 DLGAP4Q9Y2H0 992 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 DICER1Q9UPY3 1922 aaKnown RBP12.84□□□□□ -0.35
NFKB1-202ENST00000394820 OR6C75A6NL08 312 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 GALTP07902 379 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 NUDT7P0C024 238 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 SELPP16109 830 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 ATF6P18850 670 aa12.84□□□□□ -0.35
NFKB1-202ENST00000394820 S100A1P23297 94 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms