RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 SHQ1Q6PI26 577 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ARMC8Q8IUR7 673 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 NETO1Q8TDF5 533 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 ITPKCQ96DU7 683 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 PRRG3Q9BZD7 231 aa11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 FARSBQ9NSD9 589 aaKnown RBP11.35□□□□□ -0.59
UBE2D3-209ENST00000394804 A0A0U1RQS6 177 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 ANKDD1BA6NHY2 528 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 OR10H3O60404 316 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 MITFO75030 526 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 SOCS5O75159 536 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 POP4O95707 220 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 GSTM1P09488 218 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 UGT2B15P54855 530 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 DSC3Q14574 896 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 CLCA4Q14CN2 919 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 CLLU1OSQ5K130 101 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 NADSYN1Q6IA69 706 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 MED27Q6P2C8 311 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 TBC1D19Q8N5T2 526 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 FAR1Q8WVX9 515 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 SUV39H2Q9H5I1 410 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 CDH7Q9ULB5 785 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 RBMX2Q9Y388 322 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 WDR81Q562E7 1941 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 GRM6O15303 877 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 CA12O43570 354 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 PRMT3O60678 531 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 RPS3P23396 243 aaKnown RBP eCLIP11.34□□□□□ -0.595e-12■□□□□ 9.4
UBE2D3-209ENST00000394804 ATN1P54259 1190 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 C2orf80Q0P641 193 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 MRPL28Q13084 256 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 ZNF548Q8NEK5 533 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 KLHDC9Q8NEP7 349 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 RHBDF1Q96CC6 855 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 PDLIM5Q96HC4 596 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 WBP11Q9Y2W2 641 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 PTPRFP10586 1907 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 GPR39O43194 453 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 IDH3BO43837 385 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 ATG13O75143 517 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 IFNW1P05000 195 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 TSPAN19P0C672 248 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 CCL23P55773 120 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 ALDH6A1Q02252 535 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 UBE3AQ05086 875 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 NCCRP1Q6ZVX7 275 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 PIWIL3Q7Z3Z3 882 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 DNAJB7Q7Z6W7 309 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 LGI4Q8N135 537 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 PAPD5Q8NDF8 572 aaKnown RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 LGALS12Q96DT0 336 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 ZFYVE19Q96K21 471 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 CCDC115Q96NT0 180 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 PAK1IP1Q9NWT1 392 aaPredicted RBP11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 B3GNT3Q9Y2A9 372 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 MAP4K5Q9Y4K4 846 aa11.34□□□□□ -0.59
UBE2D3-209ENST00000394804 FADS2P1A8MWK0 482 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 GKP32189 559 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 HNF1BP35680 557 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 MAPK9P45984 424 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 GSTM5P46439 218 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 PNLIPRP1P54315 467 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 SMIM11AP58511 58 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 HKDC1Q2TB90 917 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 RTP2Q5QGT7 225 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 LRRC66Q68CR7 880 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 TBPL2Q6SJ96 375 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 GPR149Q86SP6 731 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 SLC34A3Q8N130 599 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 KRT78Q8N1N4 520 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 C1orf52Q8N6N3 182 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 SCAIQ8N9R8 606 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 PIH1D2Q8WWB5 315 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 TRIB2Q92519 343 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 GTPBP3Q969Y2 492 aaKnown RBP11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 GIMAP4Q9NUV9 329 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 TEKT2Q9UIF3 430 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 RNF6Q9Y252 685 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 POFUT2Q9Y2G5 429 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 H3BM21 787 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 MPZL2O60487 215 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 CCNKO75909 580 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 PEX11BO96011 259 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 POU2F1P14859 743 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 JUNBP17275 347 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 MAGEA8P43361 318 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 NUDT6P53370 316 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 FBXO43Q4G163 708 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 LRRC73Q5JTD7 316 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 C19orf18Q8NEA5 215 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 C9orf43Q8TAL5 461 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 SH3YL1Q96HL8 342 aaPredicted RBP11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 TMEM175Q9BSA9 504 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 AREL1O15033 823 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 PCDH7O60245 1069 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 SEC14L2O76054 403 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 PDE9AO76083 593 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 CCNB2O95067 398 aa11.33□□□□□ -0.6
UBE2D3-209ENST00000394804 OPN1SWP03999 348 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms