RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 VMACQ2NL98 169 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 ZNF404Q494X3 552 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 ATG9BQ674R7 924 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 FAM180BQ6P0A1 224 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 ERICH5Q6P6B1 374 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 DEF8Q6ZN54 512 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 ZNF548Q8NEK5 533 aaPredicted RBP15.68■□□□□ 0.1
PCDH1-203ENST00000394536 C11orf16Q9NQ32 467 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 ABCB8Q9NUT2 735 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 PCDHGB3Q9Y5G1 929 aa15.68■□□□□ 0.1
PCDH1-203ENST00000394536 FAM220BPB1ANY3 271 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 HPRP00739 348 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 TGFB1P01137 390 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 FKBP1BP68106 108 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 PCBP2Q15366 365 aaKnown RBP eCLIP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 DGKKQ5KSL6 1271 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 TPRG1LQ5T0D9 272 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 ZNF648Q5T619 568 aaPredicted RBP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 GALNT7Q86SF2 657 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 DEPDC4Q8N2C3 294 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 CAMKK1Q8N5S9 505 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 DPP10Q8N608 796 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 CNPPD1Q9BV87 410 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 MRPL9Q9BYD2 267 aaKnown RBP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 MRPL17Q9NRX2 175 aaKnown RBP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 CLN6Q9NWW5 311 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 A0A096LPI6 279 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 TCRBV5S2A0A599 114 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 SMIM30A4D0T7 59 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 ARNTLO00327 626 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 ADAM12O43184 909 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 CCDC159P0C7I6 412 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 C21orf33P30042 268 aaPredicted RBP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 ST8SIA6P61647 398 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 SREBF2Q12772 1141 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 KRR1Q13601 381 aaKnown RBP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 C1DQ13901 141 aaKnown RBP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 PDZK1Q5T2W1 519 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 RBM23Q86U06 439 aaKnown RBP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 ARMC8Q8IUR7 673 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 CMTM8Q8IZV2 173 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 APCDD1Q8J025 514 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 LGI4Q8N135 537 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 ZNF366Q8N895 744 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 RHBDF1Q96CC6 855 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 PPCDCQ96CD2 204 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 CORO1BQ9BR76 489 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 ZNF510Q9Y2H8 683 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 DOCK1Q14185 1865 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 KLKB1P03952 638 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 BPIP17213 487 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 MAPK8P45983 427 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 POLR2LP62875 67 aaKnown RBP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 SMARCB1Q12824 385 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 DUOXA1Q1HG43 343 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 CTU2Q2VPK5 515 aaKnown RBP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 TAS1R1Q7RTX1 841 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 BTLAQ7Z6A9 289 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 TM9SF3Q9HD45 589 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 ENPP5Q9UJA9 477 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 INTS6Q9UL03 887 aaKnown RBP15.67■□□□□ 0.1
PCDH1-203ENST00000394536 RNF6Q9Y252 685 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 OARD1Q9Y530 152 aa15.67■□□□□ 0.1
PCDH1-203ENST00000394536 IDH3BO43837 385 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 IDUAP35475 653 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 CTBSQ01459 385 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 RUNDC3AQ59EK9 446 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 RGMBQ6NW40 437 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 BBS7Q8IWZ6 715 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 PLD4Q96BZ4 506 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 DEPDC7Q96QD5 511 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 ITPAQ9BY32 194 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 ACPTQ9BZG2 426 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 FAM83DQ9H4H8 585 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 NTN4Q9HB63 628 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 CAB39Q9Y376 341 aaPredicted RBP15.66■□□□□ 0.1
PCDH1-203ENST00000394536 ARID2Q68CP9 1835 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 STSP08842 583 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 HOXD10P28358 340 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 CNTN1Q12860 1018 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 NPRL3Q12980 569 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 TIMM50Q3ZCQ8 353 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 ATP13A5Q4VNC0 1218 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 XKR7Q5GH72 579 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.66■□□□□ 0.1
PCDH1-203ENST00000394536 PIH1D2Q8WWB5 315 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 PKP4Q99569 1192 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 FEVQ99581 238 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 ABCB9Q9NP78 766 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 SDK1Q7Z5N4 2213 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 NEDD8-MDP1E9PL57 170 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 DLGAP1O14490 977 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 MYL12BO14950 172 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 TMCC2O75069 709 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 PRLP01236 227 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 BTG3Q14201 252 aaPredicted RBP15.66■□□□□ 0.1
PCDH1-203ENST00000394536 SETMARQ53H47 684 aaPredicted RBP15.66■□□□□ 0.1
PCDH1-203ENST00000394536 ELMSAN1Q6PJG2 1045 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 SBSNQ6UWP8 590 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 GANCQ8TET4 914 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms