RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 B4DXG7 233 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 TRIM77I1YAP6 450 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SULT1C2O00338 296 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 MDM4O15151 490 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 PROM1O43490 865 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 AKAP8O43823 692 aaKnown RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SLC22A3O75751 556 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 CCNB2O95067 398 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 ADRB1P08588 477 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 CYP2B6P20813 491 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF157P51786 506 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 CDC42P60953 191 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SEMA3BQ13214 749 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 LY6KQ17RY6 165 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 PRAMEF13Q5VWM6 474 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 SLC6A19Q695T7 634 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 GPR153Q6NV75 609 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF454Q8N9F8 522 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 GPRC5AQ8NFJ5 357 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 ADAMTS14Q8WXS8 1223 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 MTFMTQ96DP5 389 aaKnown RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 KCTD15Q96SI1 283 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 NPAS1Q99742 590 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 REEP4Q9H6H4 257 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 CLN6Q9NWW5 311 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 TMEM161AQ9NX61 479 aa7.44□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF490Q9ULM2 529 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-201ENST00000393077 CRYBG1Q9Y4K1 1723 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 OR14I1A6ND48 311 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 LGALS8O00214 317 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 EEF2KO00418 725 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ZBTB24O43167 697 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 NPHS1O60500 1241 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 LSM8O95777 96 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 LALBAP00709 142 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ALPLP05186 524 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 IL1R2P27930 398 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SSTR4P31391 388 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 GGT5P36269 586 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 CDKN2CP42773 168 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 PREPP48147 710 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 EPHA5P54756 1037 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SLC3A1Q07837 685 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 CDH18Q13634 790 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 TMEM132BQ14DG7 1078 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 GFOD2Q3B7J2 385 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 TCEAL6Q6IPX3 200 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 LRFN4Q6PJG9 635 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 HACD2Q6Y1H2 254 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 RBM23Q86U06 439 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SLC22A15Q8IZD6 547 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 NLGN4XQ8N0W4 816 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF527Q8NB42 609 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ZSCAN1Q8NBB4 408 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 OR7D4Q8NG98 312 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 KIF12Q96FN5 646 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 CELF6Q96J87 481 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF300Q96RE9 604 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 NLNQ9BYT8 704 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ZNF518BQ9C0D4 1074 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 MS4A7Q9GZW8 240 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 DPAGT1Q9H3H5 408 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 LDAHQ9H6V9 325 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 OSGIN1Q9UJX0 560 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 BTRCQ9Y297 605 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 DLGAP4Q9Y2H0 992 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 CASZ1Q86V15 1759 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 TAF1P21675 1872 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SLC12A8A0AV02 714 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 MROH6A6NGR9 719 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 GRID2O43424 1007 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 GRIN3BO60391 1043 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 PRMT3O60678 531 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 HPGDSO60760 199 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 VPS4BO75351 444 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 VPS26AO75436 327 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 STX11O75558 287 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SLC25A27O95847 323 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 RRASP10301 218 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 PCSK2P16519 638 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 CHRM3P20309 590 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SMSP52788 366 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 HSDL1Q3SXM5 330 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 SPOUT1Q5T280 376 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 PDSS1Q5T2R2 415 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ELP2Q6IA86 826 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 KIAA1324Q6UXG2 1013 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 USP45Q70EL2 814 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 DCP1BQ8IZD4 617 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 FRS2Q8WU20 508 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 GAL3ST3Q96A11 431 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 KLRG1Q96E93 195 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 LINC00052Q96N35 136 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 CCDC115Q96NT0 180 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 ELAC1Q9H777 363 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 BEX1Q9HBH7 125 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 FBRSL1Q9HCM7 1045 aaKnown RBP7.43□□□□□ -1.22
VTI1A-201ENST00000393077 PPP4R1LQ9P1A2 415 aa7.43□□□□□ -1.22
VTI1A-201ENST00000393077 EMCNQ9ULC0 261 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms