RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 TBC1D3LB9A6J9 549 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 G3V4G9 280 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 K7EQG2 157 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PES1O00541 588 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ENPP3O14638 875 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ABCD4O14678 606 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SURF4O15260 269 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 AHCYL1O43865 530 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CHST1O43916 411 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC24A1O60721 1099 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBX19O60806 448 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 IGSF3O75054 1194 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TADA2AO75478 443 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MTRF1O75570 445 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM63AO94886 807 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 S1PR2O95136 353 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MPZL1O95297 269 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SEMA4FO95754 770 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC25A27O95847 323 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 INSP01308 110 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 IL1AP01583 271 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 IGHV3-23P01764 117 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 HRGP04196 525 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CYC1P08574 325 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D3HP0C7X1 549 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CHTF8P0CG12 524 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 IGHV4-31P0DP07 118 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TXNP10599 105 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PRKAR1AP10644 381 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC2A2P11168 524 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PCNAP12004 261 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SELEP16581 610 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZNF182P17025 639 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CKMT2P17540 419 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TCP1P17987 556 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SRD5A1P18405 259 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ATF4P18848 351 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ERCC3P19447 782 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SDSP20132 328 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 C5AR1P21730 350 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ZP3P21754 424 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 UQCRC2P22695 453 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CA4P22748 312 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PAX3P23760 479 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CALCRP30988 508 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PCGF2P35227 344 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SPRP35270 261 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PTGER4P35408 488 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 DLSTP36957 453 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SLC1A4P43007 532 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 GPR3P46089 330 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 OR3A4PP47883 348 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TM4SF4P48230 202 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 DNA2P51530 1060 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ARFIP2P53365 341 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ARSFP54793 590 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CLDN20P56880 219 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 NUP107P57740 925 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 FOXL2P58012 376 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 FAM3BP58499 235 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TIMM10P62072 90 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 RPS11P62280 158 aaKnown RBP eCLIP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CSNK2BP67870 215 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 NKX6-1P78426 367 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SP4Q02446 784 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 FAPQ12884 760 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 GRIK3Q13003 919 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SRSF6Q13247 344 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CDH18Q13634 790 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ALKBH1Q13686 389 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 RUNX2Q13950 521 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CRMP1Q14194 572 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SAFBQ15424 915 aaKnown RBP eCLIP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 UBE2SQ16763 222 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SHROOM1Q2M3G4 852 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SOWAHAQ2M3V2 549 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 QRICH1Q2TAL8 776 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 UAP1L1Q3KQV9 507 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 KLHL26Q53HC5 615 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PAN3Q58A45 887 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 XKR7Q5GH72 579 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ARMCX4Q5H9R4 360 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 KLF17Q5JT82 389 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 SPATA46Q5T0L3 261 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MARCH8Q5T0T0 291 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 FAXCQ5TGI0 409 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 C18orf63Q68DL7 685 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 ANKRD40Q6AI12 368 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 REP15Q6BDI9 236 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D3GQ6DHY5 549 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 PLAG1Q6DJT9 500 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TBC1D3CQ6IPX1 549 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TATDN1Q6P1N9 297 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 METTL2BQ6P1Q9 378 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 DUS1LQ6P1R4 473 aaKnown RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 CORO6Q6QEF8 472 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 WDR74Q6RFH5 385 aaPredicted RBP-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 TMEM207Q6UWW9 146 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 Q75L30 129 aa-0.42□□□□□ -2.48
TRAJ28-201ENST00000390509 MOB1BQ7L9L4 216 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms