RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 CMTM8Q8IZV2 173 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 PNPLA1Q8N8W4 532 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 MYOCQ99972 504 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 CCM2Q9BSQ5 444 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 TRIM39Q9HCM9 518 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 RBMX2Q9Y388 322 aaKnown RBP15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 AGRPO00253 132 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 PSMD8P48556 350 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 IRF5Q13568 498 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 TYSND1Q2T9J0 566 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 MRPL10Q7Z7H8 261 aaKnown RBP15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 ZNF513Q8N8E2 541 aaPredicted RBP15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 SMYD1Q8NB12 490 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 RFKQ969G6 155 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 SLC35G5Q96KT7 338 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 TRIB3Q96RU7 358 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 SLC29A1Q99808 456 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 WDR83Q9BRX9 315 aaKnown RBP15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 POLR2J2Q9GZM3 115 aaKnown RBP15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 RPRD1BQ9NQG5 326 aaKnown RBP15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 MRPL39Q9NYK5 338 aaKnown RBP15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 PLOD3O60568 738 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 EPHX1P07099 455 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 BCKDHAP12694 445 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 DSTNP60981 165 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 CDK6Q00534 326 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 LARS2Q15031 903 aaKnown RBP15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 NPAS3Q8IXF0 933 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 KRTCAP2Q8N6L1 136 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 TBCCD1Q9NVR7 557 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 NRAPQ86VF7 1730 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 SOCS7O14512 581 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 S100A1P23297 94 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 VIPR1P32241 457 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 PRR5P85299 388 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 BICRALQ6AI39 1079 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 MBOAT1Q6ZNC8 495 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 CLIP4Q8N3C7 705 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 OMA1Q96E52 524 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 DUS2Q9NX74 493 aaKnown RBP15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 CMTM6Q9NX76 183 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 MAT2BQ9NZL9 334 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 RIMKLBQ9ULI2 386 aa15.69■□□□□ 0.1
PTPRN2-201ENST00000389413 GSAPA4D1B5 854 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 TLL1O43897 1013 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 DNAJB5O75953 348 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 NUDT14O95848 222 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 IL18Q14116 193 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 NDUFAF6Q330K2 333 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 C22orf39Q6P5X5 142 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 IZUMO1Q8IYV9 350 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 CALML5Q9NZT1 146 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 ING4Q9UNL4 249 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 OR10H1Q9Y4A9 318 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 PCCBP05166 539 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 GALTP07902 379 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 CHRM1P11229 460 aaPredicted RBP15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 NUDT6P53370 316 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 PLA2G16P53816 162 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 RAB25P57735 213 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 RAB41Q5JT25 222 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 NOXRED1Q6NXP6 359 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 ZNF598Q86UK7 904 aaKnown RBP15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 GPR150Q8NGU9 434 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 OR5AK3PQ8NH89 298 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 PIGXQ8TBF5 258 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 AUTS2Q8WXX7 1259 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 COQ7Q99807 217 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 LMAN2LQ9H0V9 348 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 SNTG1Q9NSN8 517 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 IFNGP01579 166 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 GKP32189 559 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 LGALS3BPQ08380 585 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 LRP8Q14114 963 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 NATD1Q8N6N6 113 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 TRBC2A0A5B9 178 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 TPST2O60704 377 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 SNX4O95219 450 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 LAMP2P13473 410 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 CTSEP14091 401 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 KLHL22Q53GT1 634 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 RBM23Q86U06 439 aaKnown RBP15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 AMZ2Q86W34 360 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 SCML4Q8N228 414 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 CENPSQ8N2Z9 138 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 SLC9A6Q92581 669 aa15.68■□□□□ 0.1
PTPRN2-201ENST00000389413 XPNPEP2O43895 674 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 PRSS56P0CW18 603 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 GTF2E2P29084 291 aaKnown RBP15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 HNF1BP35680 557 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 CYBRD1Q53TN4 286 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 LARP4Q71RC2 724 aaKnown RBP eCLIP15.67■□□□□ 0.17e-7■■■■□ 20.8
PTPRN2-201ENST00000389413 CLEC14AQ86T13 490 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 KCNN1Q92952 543 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 FCRL4Q96PJ5 515 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 IL4I1Q96RQ9 567 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 ARNT2Q9HBZ2 717 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 TMEM165Q9HC07 324 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 CSNK1G1Q9HCP0 422 aa15.67■□□□□ 0.1
PTPRN2-201ENST00000389413 PRMT3O60678 531 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms