RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 INTS11Q5TA45 600 aaKnown RBP0.31□□□□□ -2.36
SNORA40-201ENST00000388090 TMEM198Q66K66 360 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 CDC73Q6P1J9 531 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 FBXO16Q8IX29 292 aaPredicted RBP0.31□□□□□ -2.36
SNORA40-201ENST00000388090 CFAP206Q8IYR0 622 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 ZNF433Q8N7K0 673 aaPredicted RBP0.31□□□□□ -2.36
SNORA40-201ENST00000388090 ZNF491Q8N8L2 437 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 ERLEC1Q96DZ1 483 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 IMMP1LQ96LU5 166 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 INPP5EQ9NRR6 644 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 NECAP2Q9NVZ3 263 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 B3GAT1Q9P2W7 334 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 PNMA2Q9UL42 364 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 ARID2Q68CP9 1835 aa0.31□□□□□ -2.36
SNORA40-201ENST00000388090 TRAV9-2A0A087WT02 112 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 A0A0U1RQK1 487 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 ZFP92A6NM28 416 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 F8VVB4 439 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 F8VWA3 439 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 OGG1O15527 345 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 SCO2O43819 266 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 GH2P01242 217 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 IGLV3-19P01714 112 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 PIGRP01833 764 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 PKLRP30613 574 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 ARL1P40616 181 aaPredicted RBP0.3□□□□□ -2.36
SNORA40-201ENST00000388090 EIF3BP55884 814 aaKnown RBP0.3□□□□□ -2.36
SNORA40-201ENST00000388090 ZNF415Q09FC8 603 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 FRG1Q14331 258 aaKnown RBP0.3□□□□□ -2.36
SNORA40-201ENST00000388090 MELKQ14680 651 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 C16orf72Q14CZ0 275 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 LY6EQ16553 131 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 GSG1Q2KHT4 349 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 TOGARAM2Q6ZUX3 1019 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 OR5M8Q8NGP6 311 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 MORC4Q8TE76 937 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 SGCDQ92629 289 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 NUDCD1Q96RS6 583 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 CCSER1Q9C0I3 900 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 PNNQ9H307 717 aaKnown RBP0.3□□□□□ -2.36
SNORA40-201ENST00000388090 IL1RAPQ9NPH3 570 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 PKD2L2Q9NZM6 624 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 RIPOR2Q9Y4F9 1068 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 TRIM17Q9Y577 477 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 SELENOKQ9Y6D0 94 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 PCDH11YQ9BZA8 1340 aa0.3□□□□□ -2.36
SNORA40-201ENST00000388090 TRGV8A0A0C4DH27 118 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 ZSCAN5CA6NGD5 496 aaPredicted RBP0.29□□□□□ -2.36
SNORA40-201ENST00000388090 GLTPD2A6NH11 291 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 TSPAN4O14817 238 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 ZNF749O43361 778 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 SNAI2O43623 268 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 ELAVL4P26378 380 aaKnown RBP0.29□□□□□ -2.36
SNORA40-201ENST00000388090 DNA2P51530 1060 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 PFN3P60673 137 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 TFAP4Q01664 338 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 CEBPZQ03701 1054 aaKnown RBP0.29□□□□□ -2.36
SNORA40-201ENST00000388090 UBE3AQ05086 875 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 CSTF3Q12996 717 aaKnown RBP0.29□□□□□ -2.36
SNORA40-201ENST00000388090 R3HCC1LQ7Z5L2 792 aaKnown RBP0.29□□□□□ -2.36
SNORA40-201ENST00000388090 ADAMTSL2Q86TH1 951 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 RPAP2Q8IXW5 612 aaPredicted RBP0.29□□□□□ -2.36
SNORA40-201ENST00000388090 CEP57L1Q8IYX8 460 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 TMEM61Q8N0U2 210 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 SETD7Q8WTS6 366 aaKnown RBP0.29□□□□□ -2.36
SNORA40-201ENST00000388090 DEDD2Q8WXF8 326 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 SAAL1Q96ER3 474 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 APOPT1Q96IL0 206 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 MPP4Q96JB8 637 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 TECTBQ96PL2 329 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 NR1H4Q96RI1 486 aaPredicted RBP0.29□□□□□ -2.36
SNORA40-201ENST00000388090 MAP7D2Q96T17 732 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 PYM1Q9BRP8 204 aaKnown RBP0.29□□□□□ -2.36
SNORA40-201ENST00000388090 MIS12Q9H081 205 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 MOB1AQ9H8S9 216 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 ARMCX1Q9P291 453 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 PRODH2Q9UF12 536 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 ITGA11Q9UKX5 1188 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 AUP1Q9Y679 476 aa0.29□□□□□ -2.36
SNORA40-201ENST00000388090 TRBV4-1A0A0J9YWV2 114 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 TRBV5-5A0A0J9YX44 114 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 HEPACAM2A8MVW5 462 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 HOXC11O43248 304 aaPredicted RBP0.28□□□□□ -2.36
SNORA40-201ENST00000388090 ADORA3P0DMS8 318 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 GP1BBP13224 206 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 MNDAP41218 407 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 TNFRSF4P43489 277 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 TPD52P55327 224 aaPredicted RBP0.28□□□□□ -2.36
SNORA40-201ENST00000388090 TBX4P57082 545 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 MYL7Q01449 175 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 SRSF9Q13242 221 aaKnown RBP eCLIP0.28□□□□□ -2.36
SNORA40-201ENST00000388090 TAZQ16635 292 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 DPCR1Q3MIW9 517 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 ELFN2Q5R3F8 820 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 RARS2Q5T160 578 aaKnown RBP0.28□□□□□ -2.36
SNORA40-201ENST00000388090 ZNF600Q6ZNG1 722 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 NUDT13Q86X67 352 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 CEND1Q8N111 149 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 FAM89BQ8N5H3 189 aa0.28□□□□□ -2.36
SNORA40-201ENST00000388090 OR7A2PQ8NGA2 310 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms