RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 ACADVLP49748 655 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 CBX3Q13185 183 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 PIH1D2Q8WWB5 315 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC9A6Q92581 669 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 XKR8Q9H6D3 395 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 TRNAU1APQ9NX07 287 aaKnown RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 MROH6A6NGR9 719 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 H7BY64 318 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 ERI3O43414 337 aaKnown RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 TFPTP0C1Z6 253 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 CYP4B1P13584 511 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 EEFSECP57772 596 aaKnown RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 MCCD1P59942 119 aaPredicted RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 STX4Q12846 297 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 RFTN2Q52LD8 501 aaPredicted RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 FAM78AQ5JUQ0 283 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 EIF3MQ7L2H7 374 aaKnown RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 ZNF605Q86T29 641 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 CCDC103Q8IW40 242 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 VANGL1Q8TAA9 524 aaPredicted RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC22A18Q96BI1 424 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 PRAP1Q96NZ9 151 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 VPS35Q96QK1 796 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 SORT1Q99523 831 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 CDCA3Q99618 268 aaPredicted RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 RSL24D1Q9UHA3 163 aaKnown RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 PCTPQ9UKL6 214 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 FER1L6Q2WGJ9 1857 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 DOCK5Q9H7D0 1870 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 PPP6CO00743 305 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 KRT8P05787 483 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 PTX3P26022 381 aaPredicted RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 IFNGR2P38484 337 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 HTR6P50406 440 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 NR1H2P55055 460 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 CPEB1Q9BZB8 566 aaKnown RBP13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 EXD2Q9NVH0 621 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 USE1Q9NZ43 259 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 HS3ST2Q9Y278 367 aa13.78□□□□□ -0.2
SHROOM1-203ENST00000378679 A0A0J9YVX5 310 aa13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 KLHL33A6NCF5 533 aa13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 TP73O15350 636 aa13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 CDH1P12830 882 aa13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 ALAS2P22557 587 aa13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 SLC9A5Q14940 896 aa13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 TNFAIP8L2Q6P589 184 aaPredicted RBP13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 NUDT13Q86X67 352 aa13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 NECTIN4Q96NY8 510 aa13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 RC3H2Q9HBD1 1191 aaKnown RBP13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 OR1A2Q9Y585 309 aa13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 TRIP12Q14669 1992 aaPredicted RBP13.77□□□□□ -0.2
SHROOM1-203ENST00000378679 VEGFDO43915 354 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 MPC1LP0DKB6 136 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 NT5EP21589 574 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 S100A5P33763 92 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 YAP1P46937 504 aaKnown RBP13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 SIM2Q14190 667 aaPredicted RBP13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 ABRAXAS2Q15018 415 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 SPIN4Q56A73 249 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 TCEAL5Q5H9L2 206 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 LIPIQ6XZB0 460 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 SFRP1Q8N474 314 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 ZBED6CLQ96FA7 236 aaPredicted RBP13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 TRIM8Q9BZR9 551 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 GSTO2Q9H4Y5 243 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 ZCCHC3Q9NUD5 404 aaKnown RBP13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 ACSL5Q9ULC5 683 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 PDE10AQ9Y233 779 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 ARFGEF1Q9Y6D6 1849 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 AQP12BA6NM10 295 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 H3BSA7 217 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 AP3D1O14617 1153 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 ARPC2O15144 300 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 SLC7A1P30825 629 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 ERVPABLB-1P60509 514 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 CD300LGQ6UXG3 332 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 PARS2Q7L3T8 475 aaKnown RBP13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 GATAD2AQ86YP4 633 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 AQP12AQ8IXF9 295 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 OR2A12Q8NGT7 310 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 TADA1Q96BN2 335 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 MYEOVQ96EZ4 313 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 REXO4Q9GZR2 422 aaKnown RBP13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 MEAF6Q9HAF1 191 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 FZD3Q9NPG1 666 aa13.77□□□□□ -0.21
SHROOM1-203ENST00000378679 RHPN2P1A8MT19 583 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 B4DGG1 531 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 hCG_2039718K7EN88 272 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 MAGEB3O15480 346 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 SLC16A8O95907 504 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 TIMP2P16035 220 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 RAB8AP61006 207 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 COPZ1P61923 177 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 TRAP1Q12931 704 aaKnown RBP13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 ADGRE1Q14246 886 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 NFE2L1Q14494 772 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 NR1D2Q14995 579 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 RFX4Q33E94 735 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 MACC1Q6ZN28 852 aa13.76□□□□□ -0.21
SHROOM1-203ENST00000378679 GALNT5Q7Z7M9 940 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms