RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 TCF12Q99081 682 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 SELENOSQ9BQE4 189 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 ASIC3Q9UHC3 531 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 VPS9D1Q9Y2B5 631 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 KLK4Q9Y5K2 254 aa18.3■□□□□ 0.52
CBWD3-204ENST00000377349 FAM237BA0A1B0GVD1 139 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 USP1O94782 785 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 EIF2S1P05198 315 aaKnown RBP18.29■□□□□ 0.52
CBWD3-204ENST00000377349 MAGEA6P43360 314 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 VSX2P58304 361 aaPredicted RBP18.29■□□□□ 0.52
CBWD3-204ENST00000377349 GRM7Q14831 915 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 KLHL38Q2WGJ6 581 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 ZC3H12BQ5HYM0 836 aaKnown RBP18.29■□□□□ 0.52
CBWD3-204ENST00000377349 TCTE1Q5JU00 501 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 AGAP7PQ5VUJ5 663 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 CENPUQ71F23 418 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 TICAM1Q8IUC6 712 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 SPNS2Q8IVW8 549 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 REXO1L1PQ8IX06 675 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 TTC29Q8NA56 475 aaPredicted RBP18.29■□□□□ 0.52
CBWD3-204ENST00000377349 GRHL3Q8TE85 626 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 DENND1AQ8TEH3 1009 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 AGAP4Q96P64 663 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 AGPAT4Q9NRZ5 378 aa18.29■□□□□ 0.52
CBWD3-204ENST00000377349 FBN2P35556 2912 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 A0A0J9YVX5 310 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 TARM1B6A8C7 271 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 PIM1P11309 404 aaPredicted RBP18.28■□□□□ 0.52
CBWD3-204ENST00000377349 MLNP12872 115 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 ELOAQ14241 798 aaKnown RBP18.28■□□□□ 0.52
CBWD3-204ENST00000377349 FASTKQ14296 549 aaKnown RBP18.28■□□□□ 0.52
CBWD3-204ENST00000377349 TUBB8Q3ZCM7 444 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 FRMPD2BQ6IN97 320 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 SUSD1Q6UWL2 747 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 PARP9Q8IXQ6 854 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 ZUFSPQ96AP4 578 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 CAPZA3Q96KX2 299 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 LHPPQ9H008 270 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 INTS10Q9NVR2 710 aaKnown RBP18.28■□□□□ 0.52
CBWD3-204ENST00000377349 NXT1Q9UKK6 140 aaKnown RBP18.28■□□□□ 0.52
CBWD3-204ENST00000377349 MAU2Q9Y6X3 613 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 FAM169AQ9Y6X4 670 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 SCN3AQ9NY46 2000 aa18.28■□□□□ 0.52
CBWD3-204ENST00000377349 DCHS2Q6V1P9 2916 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 OTOGQ6ZRI0 2925 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 A0A1W2PPV9 198 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 MAGEB16A2A368 324 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 ARHGEF33A8MVX0 844 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 FKBP9O95302 570 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 RPA3P35244 121 aaPredicted RBP18.27■□□□□ 0.52
CBWD3-204ENST00000377349 SLC1A2P43004 574 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 YBX1P67809 324 aaKnown RBP18.27■□□□□ 0.52
CBWD3-204ENST00000377349 MPP1Q00013 466 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 ZNF169Q14929 603 aaPredicted RBP18.27■□□□□ 0.52
CBWD3-204ENST00000377349 CYP1B1Q16678 543 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 LONRF1Q17RB8 773 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 TTLL9Q3SXZ7 439 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.27■□□□□ 0.52
CBWD3-204ENST00000377349 WASHC2DQ5SRD0 308 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 C1QL3Q5VWW1 255 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 PPIL6Q8IXY8 311 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 MCUQ8NE86 351 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 HMGCLL1Q8TB92 370 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 DNAJB14Q8TBM8 379 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 FAR1Q8WVX9 515 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 DDX47Q9H0S4 455 aaKnown RBP18.27■□□□□ 0.52
CBWD3-204ENST00000377349 SYNPO2LQ9H987 977 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 FAM114A2Q9NRY5 505 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 SEMA3GQ9NS98 782 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 SNX12Q9UMY4 172 aa18.27■□□□□ 0.52
CBWD3-204ENST00000377349 LOC105369274A0A096LPK9 316 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 LOC102723532A0A0G2JNH3 316 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 BANF1O75531 89 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 KLHL18O94889 574 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 CATP04040 527 aaKnown RBP18.26■□□□□ 0.51
CBWD3-204ENST00000377349 ERVK-10P10266 1014 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 CMPK1P30085 196 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 FNTAP49354 379 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 RBBP7Q16576 425 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 B3GNTL1Q67FW5 361 aaPredicted RBP18.26■□□□□ 0.51
CBWD3-204ENST00000377349 RNF44Q7L0R7 432 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 OR4N4Q8N0Y3 316 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 PPFIBP2Q8ND30 876 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 OR2L3Q8NG85 312 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 OR2A1Q8NGT9 310 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 ACTRT1Q8TDG2 376 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 THOC3Q96J01 351 aaKnown RBP18.26■□□□□ 0.51
CBWD3-204ENST00000377349 SLC30A3Q99726 388 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 SLX1AQ9BQ83 275 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 KCNF1Q9H3M0 494 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 IARS2Q9NSE4 1012 aaKnown RBP18.26■□□□□ 0.51
CBWD3-204ENST00000377349 SPATA7Q9P0W8 599 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 CACNA1CQ13936 2221 aa18.26■□□□□ 0.51
CBWD3-204ENST00000377349 HYKKA2RU49 373 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 SRPX2O60687 465 aaPredicted RBP18.25■□□□□ 0.51
CBWD3-204ENST00000377349 EDN3P14138 238 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 ATP5DP30049 168 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 KLC1Q07866 573 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 FAM214AQ32MH5 1076 aa18.25■□□□□ 0.51
CBWD3-204ENST00000377349 HSP90AA5PQ58FG0 334 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms