RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 PROX1Q92786 737 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 DPH2Q9BQC3 489 aaPredicted RBP13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 MCOLN1Q9GZU1 580 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 GABARAPL1Q9H0R8 117 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 TM9SF3Q9HD45 589 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 KIF17Q9P2E2 1029 aa13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 CAB39Q9Y376 341 aaPredicted RBP13.72□□□□□ -0.21
CLCNKA-202ENST00000375692 PLXNA3P51805 1871 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 SCAMP3O14828 347 aaKnown RBP13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 WNT9AO14904 365 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 AIREO43918 545 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 FKBP9O95302 570 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 RHOCP08134 193 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 IL1RNP18510 177 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 GADD45AP24522 165 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 DNAJA1P31689 397 aaKnown RBP13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 ABHD18Q0P651 414 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 KIAA1614Q5VZ46 1190 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 TSPYL5Q86VY4 417 aaPredicted RBP13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 HORMAD1Q86X24 394 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 PSD4Q8NDX1 1056 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 CTRCQ99895 268 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 THG1LQ9NWX6 298 aaKnown RBP13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 QPCTLQ9NXS2 382 aa13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 SAMD4AQ9UPU9 718 aaKnown RBP13.71□□□□□ -0.21
CLCNKA-202ENST00000375692 PABPN1LA6NDY0 278 aaKnown RBP13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 H7C0S8 307 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 RFXANKO14593 260 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 SNPHO15079 494 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 CCNDBP1O95273 360 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 EPB42P16452 691 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 HOXB9P17482 250 aaPredicted RBP13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 EFNA1P20827 205 aaPredicted RBP13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 TCEA1P23193 301 aaKnown RBP13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 CLDN8P56748 225 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 ZNF404Q494X3 552 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 ATXN7L2Q5T6C5 722 aaPredicted RBP13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 RNF219Q5W0B1 726 aaPredicted RBP13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 CNKSR3Q6P9H4 555 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 RSPO2Q6UXX9 243 aaPredicted RBP13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 AKAP14Q86UN6 197 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 STK40Q8N2I9 435 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 RNF175Q8N4F7 328 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 CARNMT1Q8N4J0 409 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 OR6K2Q8NGY2 324 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 USP7Q93009 1102 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 LATS2Q9NRM7 1088 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 HSPE1-MOB4S4R3N1 261 aa13.71□□□□□ -0.22
CLCNKA-202ENST00000375692 CHD5Q8TDI0 1954 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 A8MX80 341 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 M0R082 166 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 GJB5O95377 273 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 PRAMEF1O95521 474 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 CD160O95971 181 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 FABP3P05413 133 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 FPR1P21462 350 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 GRK5P34947 590 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 RGS4P49798 205 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 CDH4P55283 916 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 ARF5P84085 180 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 CDC20Q12834 499 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 FADDQ13158 208 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 GPR153Q6NV75 609 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 SYTL1Q8IYJ3 562 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 ENTHD1Q8IYW4 607 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 SLC38A4Q969I6 547 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 EFHD2Q96C19 240 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 ITPAQ9BY32 194 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 GKN1Q9NS71 199 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 MAN2B2Q9Y2E5 1009 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 AP3M1Q9Y2T2 418 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 ZNF451Q9Y4E5 1061 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 PLXNA4Q9HCM2 1894 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 CHD7Q9P2D1 2997 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 AGAP5A6NIR3 686 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 METTL15A6NJ78 407 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 CLDN24A6NM45 220 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 RFPL2O75678 378 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 KLKB1P03952 638 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 EBLN1P0CF75 366 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 ZNF7P17097 686 aaPredicted RBP13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 EPORP19235 508 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 NPRL3Q12980 569 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 DUSP4Q13115 394 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 LRIT3Q3SXY7 679 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 RTP2Q5QGT7 225 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 PDE12Q6L8Q7 609 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 SELENOMQ8WWX9 145 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 ELMO1Q92556 727 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 HSH2DQ96JZ2 352 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 KCNC2Q96PR1 638 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 NTMT1Q9BV86 223 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 NACA2Q9H009 215 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 ASB8Q9H765 288 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 CPNE5Q9HCH3 593 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 AFF4Q9UHB7 1163 aaKnown RBP13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 TRPS1Q9UHF7 1281 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 ERVW-1Q9UQF0 538 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 PCDHB1Q9Y5F3 818 aa13.7□□□□□ -0.22
CLCNKA-202ENST00000375692 LOC100506127A0A0U1RQW1 187 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms