RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 MGAT4DA6NG13 374 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 HAS3O00219 553 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 AREL1O15033 823 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 TLL1O43897 1013 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 PCDHGA12O60330 932 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 CLDN9O95484 217 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 IGFBP1P08833 259 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-202ENST00000375597 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
MCF2L-202ENST00000375597 CTSOP43234 321 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-202ENST00000375597 CTSKP43235 329 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 MC1RQ01726 317 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 ANKRD13BQ86YJ7 626 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 SORCS1Q8WY21 1168 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 TRIB2Q92519 343 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 DACT3Q96B18 629 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-202ENST00000375597 FEVQ99581 238 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 APOL4Q9BPW4 351 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 DSN1Q9H410 356 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 TBC1D14Q9P2M4 693 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 PPT2Q9UMR5 302 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 SLC38A8A6NNN8 435 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 TRBC1P01850 177 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 ANXA5P08758 320 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 ALPPL2P10696 532 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 HNF1BP35680 557 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 PPP2R2BQ00005 443 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 HECTD3Q5T447 861 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 CCDC117Q8IWD4 279 aaPredicted RBP11.45□□□□□ -0.58
MCF2L-202ENST00000375597 CENPOQ9BU64 300 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 SNTG1Q9NSN8 517 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 CCDC88CQ9P219 2028 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 A0A0G2JMZ2 1700 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 LRRC37A2A6NM11 1700 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 H0YAE9 185 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 KRT75O95678 551 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 DGKAP23743 735 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 CD40LGP29965 261 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 CLCN7P51798 805 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 CCSMST1Q4G0I0 132 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 RBM48Q5RL73 367 aaKnown RBP11.45□□□□□ -0.58
MCF2L-202ENST00000375597 ATAD3BQ5T9A4 648 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 STEAP3Q658P3 488 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 GHDCQ8N2G8 530 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 TERB1Q8NA31 727 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 PDPRQ8NCN5 879 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 ATL1Q8WXF7 558 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 RHBDF1Q96CC6 855 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 SYT17Q9BSW7 474 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 SORBS1Q9BX66 1292 aaKnown RBP11.45□□□□□ -0.58
MCF2L-202ENST00000375597 KAT8Q9H7Z6 458 aaKnown RBP11.45□□□□□ -0.58
MCF2L-202ENST00000375597 RMND5AQ9H871 391 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 NUDT4Q9NZJ9 180 aa11.45□□□□□ -0.58
MCF2L-202ENST00000375597 CFAP20Q9Y6A4 193 aaKnown RBP11.45□□□□□ -0.58
MCF2L-202ENST00000375597 WDR90Q96KV7 1748 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 SNX4O95219 450 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 TGFB1P01137 390 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 ESR1P03372 595 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 PABPC1P11940 636 aaKnown RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 IFI30P13284 250 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 ETFAP13804 333 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 ATF6P18850 670 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 PTGER3P43115 390 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 MAGEA8P43361 318 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 SLC11A1P49279 550 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 RACK1P63244 317 aaKnown RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 PRKCZQ05513 592 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 ATP13A5Q4VNC0 1218 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 RNASE12Q5GAN4 147 aaKnown RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 GTF2IRD2BQ6EKJ0 949 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 ZNF852Q6ZMS4 543 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 USP51Q70EK9 711 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 ZNF551Q7Z340 670 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 GTF2IRD2Q86UP8 949 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 PTRH1Q86Y79 214 aaKnown RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 DEPDC4Q8N2C3 294 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 CITED4Q96RK1 184 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 NUSAP1Q9BXS6 441 aaKnown RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 BRINP2Q9C0B6 783 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 DNAJC27Q9NZQ0 273 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 ABT1Q9ULW3 272 aaKnown RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 BTBD3Q9Y2F9 522 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 PCDHB7Q9Y5E2 793 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 PDZK1P1A8MUH7 402 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 LOC110117498-PIK3R3F6TDL0 507 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 JRKO75564 520 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 SDC1P18827 310 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 EPORP19235 508 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 SOX3P41225 446 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 YBEYP58557 167 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 TSTQ16762 297 aaKnown RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 RFX4Q33E94 735 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 TPRG1LQ5T0D9 272 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 LDLRAD1Q5T700 205 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 FUT10Q6P4F1 479 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 TNFAIP8L2Q6P589 184 aaPredicted RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 TMPRSS11BQ86T26 416 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 C1orf52Q8N6N3 182 aaKnown RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 ZFP41Q8N8Y5 198 aa11.44□□□□□ -0.58
MCF2L-202ENST00000375597 WDR36Q8NI36 951 aaKnown RBP11.44□□□□□ -0.58
MCF2L-202ENST00000375597 KCNJ9Q92806 393 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms