RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 KCNC2Q96PR1 638 aa20.01■□□□□ 0.79
TMEFF1-201ENST00000374879 OR5M11Q96RB7 305 aa20.01■□□□□ 0.79
TMEFF1-201ENST00000374879 GTPBP2Q9BX10 602 aaKnown RBP20.01■□□□□ 0.79
TMEFF1-201ENST00000374879 TKTL2Q9H0I9 626 aa20.01■□□□□ 0.79
TMEFF1-201ENST00000374879 LIN7BQ9HAP6 207 aa20.01■□□□□ 0.79
TMEFF1-201ENST00000374879 OLA1Q9NTK5 396 aaKnown RBP20.01■□□□□ 0.79
TMEFF1-201ENST00000374879 TMLHEQ9NVH6 421 aa20.01■□□□□ 0.79
TMEFF1-201ENST00000374879 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.01■□□□□ 0.79
TMEFF1-201ENST00000374879 GJD2Q9UKL4 321 aa20.01■□□□□ 0.79
TMEFF1-201ENST00000374879 ALG5Q9Y673 324 aa20.01■□□□□ 0.79
TMEFF1-201ENST00000374879 CDC7O00311 574 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 TNFRSF21O75509 655 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 SLC10A3P09131 477 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 CSF3P09919 207 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 IL1RNP18510 177 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 TNNI3P19429 210 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 NR6A1Q15406 480 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 GPR19Q15760 415 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 SLC27A1Q6PCB7 646 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 IL27RAQ6UWB1 636 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 RNF130Q86XS8 419 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 OR52B6Q8NGF0 335 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 TBC1D20Q96BZ9 403 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 RAD9AQ99638 391 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 MFSD1Q9H3U5 465 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 C1orf109Q9NX04 203 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 SAMHD1Q9Y3Z3 626 aaKnown RBP20■□□□□ 0.79
TMEFF1-201ENST00000374879 MICAL3Q7RTP6 2002 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 YJEFN3A6XGL0 299 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 H3BM21 787 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 AOC2O75106 756 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 SLC22A5O76082 557 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 CNPP09543 421 aaKnown RBP20■□□□□ 0.79
TMEFF1-201ENST00000374879 DSC3Q14574 896 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 AP5B1Q2VPB7 878 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 ANKS3Q6ZW76 656 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 CDH24Q86UP0 819 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 ATCAYQ86WG3 371 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 HRASLS5Q96KN8 279 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 C1orf74Q96LT6 269 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 ASPNQ9BXN1 380 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 NXF3Q9H4D5 531 aaKnown RBP20■□□□□ 0.79
TMEFF1-201ENST00000374879 RAD18Q9NS91 495 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 PLCXD1Q9NUJ7 323 aa20■□□□□ 0.79
TMEFF1-201ENST00000374879 PLA2G10O15496 165 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 MAFKO60675 156 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 CPN2P22792 545 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 ST3GAL4Q11206 333 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 EIF2B5Q13144 721 aaKnown RBP19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 MADCAM1Q13477 382 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 DOC2BQ14184 412 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 VEPH1Q14D04 833 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 OR8H3Q8N146 312 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 VANGL1Q8TAA9 524 aaPredicted RBP19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 FAM120BQ96EK7 910 aaKnown RBP19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 COLEC11Q9BWP8 271 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 IL1RAPQ9NPH3 570 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 WDR47O94967 919 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 DDCP20711 480 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 AKAP5P24588 427 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 AKT1P31749 480 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 BRCC3P46736 316 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 KCNQ1P51787 676 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 ERVPABLB-1P60509 514 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 PSPHP78330 225 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 MED22Q15528 200 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 SPANXN4Q5MJ08 99 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 FBXO47Q5MNV8 452 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 SAXO2Q658L1 398 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 PM20D1Q6GTS8 502 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 PAQR3Q6TCH7 311 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 FAM131AQ6UXB0 335 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 ARHGAP12Q8IWW6 846 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 WDCPQ9H6R7 721 aa19.99■□□□□ 0.79
TMEFF1-201ENST00000374879 GFRA2O00451 464 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 RECQL4O94761 1208 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 CFL1P23528 166 aaKnown RBP19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 GZMMP51124 257 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 OLR1P78380 273 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 ZNF792Q3KQV3 632 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 C10orf62Q5T681 223 aaPredicted RBP19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 OR56A4Q8NGH8 313 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 ENKURQ8TC29 256 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 TBATAQ96M53 351 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 SPATA9Q9BWV2 254 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 EXOSC4Q9NPD3 245 aaKnown RBP19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 ING3Q9NXR8 418 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 AUP1Q9Y679 476 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 FAM220BPB1ANY3 271 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 E9PQ18 207 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 SCAMP3O14828 347 aaKnown RBP19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 MATN3O15232 486 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 VLDLRP98155 873 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 SMARCB1Q12824 385 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 SEMA3AQ14563 771 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 PTPRCAPQ14761 206 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 GALNT10Q86SR1 603 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 CALHM3Q86XJ0 350 aa19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 DNAJA4Q8WW22 397 aaPredicted RBP19.98■□□□□ 0.79
TMEFF1-201ENST00000374879 DUSP16Q9BY84 665 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms