RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 ZNF385DQ9H6B1 395 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 TASP1Q9H6P5 420 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 CAB39LQ9H9S4 337 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 TCF7L2Q9NQB0 619 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 OLA1Q9NTK5 396 aaKnown RBP4.73□□□□□ -1.65
USP48-202ENST00000374730 MRGBPQ9NV56 204 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 RBM22Q9NW64 420 aaKnown RBP eCLIP4.73□□□□□ -1.65
USP48-202ENST00000374730 NMRK1Q9NWW6 199 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 SLC7A8Q9UHI5 535 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 IPO11Q9UI26 975 aaKnown RBP4.73□□□□□ -1.65
USP48-202ENST00000374730 SLC39A10Q9ULF5 831 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 LRCH1Q9Y2L9 728 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 ACOT9Q9Y305 439 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 MICAL3Q7RTP6 2002 aa4.73□□□□□ -1.65
USP48-202ENST00000374730 ANAPC1Q9H1A4 1944 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 A0A087WWL8 130 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 GOLGA8QA0A0J9YX86 632 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 A1L4Q6 167 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 GOLGA8OA6NCC3 632 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 MEI4A8MW99 385 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 F8W810 466 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 GOLGA8NF8WBI6 632 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 PHGDHO43175 533 aaKnown RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 SLC7A4O43246 635 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 ZBTB14O43829 449 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 TBX10O75333 385 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 PMPCBO75439 489 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 NEBLO76041 1014 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 RTN3O95197 1032 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 WISP3O95389 354 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 PIGNO95427 931 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 MOCS2O96007 188 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 PENKP01210 267 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 IGLV3-27P01718 113 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 FESP07332 822 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 MMP2P08253 660 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 NPSP0C0P6 89 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 OR4Q2P0C623 313 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 ZDHHC11BP0C7U3 371 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 COX4I1P13073 169 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 STMN1P16949 149 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 HOXB8P17481 243 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 ITGAXP20702 1163 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 ATP5F1P24539 256 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 CCND3P30281 292 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 SLC26A3P40879 764 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 SLC1A2P43004 574 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 LEPRP48357 1165 aaKnown RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 SLC11A2P49281 568 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 PGFP49763 221 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 SERPINH1P50454 418 aaKnown RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 RPL14P50914 215 aaKnown RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 RENBPP51606 427 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 ACLYP53396 1101 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 UCP3P55916 312 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 TPTEP56180 551 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 YBEYP58557 167 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 TAS2R39P59534 338 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 AP2B1P63010 937 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 ACVR1Q04771 509 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 IL10RBQ08334 325 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 SMARCB1Q12824 385 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 MSLNQ13421 630 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 LAMB3Q13751 1172 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 BTG3Q14201 252 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 SMAD1Q15797 465 aaKnown RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 CNGA3Q16281 694 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 PARP15Q460N3 678 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 C5orf22Q49AR2 442 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 SLC9B1Q4ZJI4 515 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 TECRLQ5HYJ1 363 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 MS4A13Q5J8X5 152 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 CFAP157Q5JU67 520 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 VWA5B1Q5TIE3 1220 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 C1orf146Q5VVC0 180 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 SNX30Q5VWJ9 437 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 SEL1L3Q68CR1 1132 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 ZNF470Q6ECI4 717 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 ZNF280DQ6N043 979 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 NEPROQ6NW34 567 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 IRGCQ6NXR0 463 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 RAPH1Q70E73 1250 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 PARS2Q7L3T8 475 aaKnown RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 PIWIL4Q7Z3Z4 852 aaKnown RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 ZNF280BQ86YH2 543 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 APLFQ8IW19 511 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 MFSD6LQ8IWD5 586 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 DENND6AQ8IWF6 608 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 SCN4BQ8IWT1 228 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 LSMEM2Q8N112 164 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 FSTL5Q8N475 847 aaPredicted RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 ATP6V0D2Q8N8Y2 350 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 ZBTB34Q8NCN2 500 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 PPFIBP2Q8ND30 876 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 SPPL2BQ8TCT7 592 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 MAPK15Q8TD08 544 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 C2orf15Q8WU43 125 aaKnown RBP4.72□□□□□ -1.65
USP48-202ENST00000374730 KCTD4Q8WVF5 259 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 CCDC126Q96EE4 140 aa4.72□□□□□ -1.65
USP48-202ENST00000374730 HMCESQ96FZ2 354 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms