RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 HSPE1-MOB4S4R3N1 261 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 A0A0J9YVX5 310 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 A8MX80 341 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 C5orf67F2Z3F1 127 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 CCL16O15467 120 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 UGT2B11O75310 529 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 MYO1DO94832 1006 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 ATE1O95260 518 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 FGF19O95750 216 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 CCDC159P0C7I6 412 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 CCNA2P20248 432 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 VIPR1P32241 457 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 ARHGDIAP52565 204 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 PHC1P78364 1004 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 CTBSQ01459 385 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 HSPA14Q0VDF9 509 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 KCNAB2Q13303 367 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 GPM6BQ13491 265 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 PTCRAQ6ISU1 281 aaPredicted RBP13.53□□□□□ -0.24
HMGCL-203ENST00000374490 SHQ1Q6PI26 577 aaKnown RBP13.53□□□□□ -0.24
HMGCL-203ENST00000374490 GDPD4Q6W3E5 623 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 R3HCC1LQ7Z5L2 792 aaKnown RBP13.53□□□□□ -0.24
HMGCL-203ENST00000374490 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 CHDHQ8NE62 594 aaPredicted RBP13.53□□□□□ -0.24
HMGCL-203ENST00000374490 CLHC1Q8NHS4 586 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 NUDT8Q8WV74 236 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 SKA2Q8WVK7 121 aaPredicted RBP13.53□□□□□ -0.24
HMGCL-203ENST00000374490 ZNF566Q969W8 418 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 TSSK3Q96PN8 268 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 ADNPQ9H2P0 1102 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 GPN2Q9H9Y4 310 aaPredicted RBP13.53□□□□□ -0.24
HMGCL-203ENST00000374490 SMURF2Q9HAU4 748 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 TM9SF3Q9HD45 589 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 FAM120CQ9NX05 1096 aaKnown RBP13.53□□□□□ -0.24
HMGCL-203ENST00000374490 PPT2Q9UMR5 302 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 ERVW-1Q9UQF0 538 aa13.53□□□□□ -0.24
HMGCL-203ENST00000374490 RUVBL1Q9Y265 456 aaKnown RBP13.53□□□□□ -0.24
HMGCL-203ENST00000374490 SH3PXD2BA1X283 911 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 FAM86C2PA6NEL3 165 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 HS6ST1O60243 411 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 UGT2B4P06133 528 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 GSTM1P09488 218 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 PPIBP23284 216 aaKnown RBP13.52□□□□□ -0.25
HMGCL-203ENST00000374490 DDX6P26196 483 aaKnown RBP eCLIP13.52□□□□□ -0.25
HMGCL-203ENST00000374490 MAP4P27816 1152 aaKnown RBP13.52□□□□□ -0.25
HMGCL-203ENST00000374490 PTPN6P29350 595 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 HALP42357 657 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 CTSOP43234 321 aaPredicted RBP13.52□□□□□ -0.25
HMGCL-203ENST00000374490 RECQLP46063 649 aaPredicted RBP13.52□□□□□ -0.25
HMGCL-203ENST00000374490 YAP1P46937 504 aaKnown RBP13.52□□□□□ -0.25
HMGCL-203ENST00000374490 STK19P49842 368 aaPredicted RBP13.52□□□□□ -0.25
HMGCL-203ENST00000374490 PNLIPRP1P54315 467 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 GSTM4Q03013 218 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 PCDH1Q08174 1060 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 PGS1Q32NB8 556 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 ZNF691Q5VV52 312 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 CPZQ66K79 652 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 NOXRED1Q6NXP6 359 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 CYP2U1Q7Z449 544 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 PHACTR4Q8IZ21 702 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 NETO1Q8TDF5 533 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 ASZ1Q8WWH4 475 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 VOPP1Q96AW1 172 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 CCDC138Q96M89 665 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 BCL7BQ9BQE9 202 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 PALMDQ9NP74 551 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 TBC1D23Q9NUY8 699 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 TBCCD1Q9NVR7 557 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 CORO2BQ9UQ03 480 aa13.52□□□□□ -0.25
HMGCL-203ENST00000374490 NCOR1O75376 2440 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 LOC100130705A0A1B0GUX0 176 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 A0A1W2PRU2 124 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 MRPS14O60783 128 aaKnown RBP13.51□□□□□ -0.25
HMGCL-203ENST00000374490 EPN2O95208 641 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 PABPC1P11940 636 aaKnown RBP13.51□□□□□ -0.25
HMGCL-203ENST00000374490 IL9P15248 144 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 HLA-FP30511 346 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 HNF4AP41235 474 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 IRF8Q02556 426 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 LRRC74AQ0VAA2 488 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 CHIT1Q13231 466 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 CES5AQ6NT32 575 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 NEK5Q6P3R8 708 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 DPY19L3Q6ZPD9 716 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 SYT12Q8IV01 421 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 ZDHHC21Q8IVQ6 265 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 CMTM8Q8IZV2 173 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 SPARTQ8N0X7 666 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 TRAM1L1Q8N609 369 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 DDHD1Q8NEL9 900 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 FNDC8Q8TC99 324 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 FBLIM1Q8WUP2 373 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 ELMO1Q92556 727 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 APIPQ96GX9 242 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 APOLD1Q96LR9 279 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 FAM83CQ9BQN1 747 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 INPP5KQ9BT40 448 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 DCUN1D5Q9BTE7 237 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 AMBRA1Q9C0C7 1298 aa13.51□□□□□ -0.25
HMGCL-203ENST00000374490 FAM83DQ9H4H8 585 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms