RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 LOC102723532A0A0G2JNH3 316 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 POM121CA8CG34 1229 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 PPIBP23284 216 aaKnown RBP9.99□□□□□ -0.81
CD28-202ENST00000374481 PTPN3P26045 913 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 PGGT1BP53609 377 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 C22orf42Q6IC83 251 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 THAP6Q8TBB0 222 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 EDEM1Q92611 657 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 FOPNLQ96NB1 174 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 ACO2Q99798 780 aaKnown RBP9.99□□□□□ -0.81
CD28-202ENST00000374481 MUC3BQ9H195 1237 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 MTMR10Q9NXD2 777 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 TVP23BQ9NYZ1 205 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 SLCO3A1Q9UIG8 710 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 PRELID3BQ9Y3B1 194 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 BCL9LQ86UU0 1499 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 KPNA6O60684 536 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 GGT5P36269 586 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 WNT3AP56704 352 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 GRIN2CQ14957 1233 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 SPHARQ15513 63 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 C17orf107Q6ZR85 190 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 RAB11FIP2Q7L804 512 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 ZFPM1Q8IX07 1006 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 C12orf29Q8N999 325 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 SMARCD1Q96GM5 515 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 KCNA7Q96RP8 456 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 NUDT15Q9NV35 164 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 ANGPT4Q9Y264 503 aa9.99□□□□□ -0.81
CD28-202ENST00000374481 FER1L4A9Z1Z3 1794 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 A0A096LPI6 279 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 ARVCFO00192 962 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 EEF1E1O43324 174 aaKnown RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 LDOC1O95751 146 aaPredicted RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 H2AFB2P0C5Z0 115 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 C21orf33P30042 268 aaPredicted RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 PPP2R1BP30154 601 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 MAGEA12P43365 314 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 AFF1P51825 1210 aaKnown RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 GBX2P52951 348 aaPredicted RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 GP2P55259 537 aaKnown RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 OLIG2Q13516 323 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 COQ5Q5HYK3 327 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 SYT6Q5T7P8 510 aaPredicted RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 PPP1R26Q5T8A7 1209 aaPredicted RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 ZNF691Q5VV52 312 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 XRRA1Q6P2D8 792 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 VN1R5Q7Z5H4 357 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 RNF130Q86XS8 419 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 PYROXD2Q8N2H3 581 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 LIX1Q8N485 282 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 C11orf65Q8NCR3 313 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 IL17RDQ8NFM7 739 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 HCAR2Q8TDS4 363 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 TTPALQ9BTX7 342 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 MTG2Q9H4K7 406 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 NMRK2Q9NPI5 230 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 MGAT4CQ9UBM8 478 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 TRPC4Q9UBN4 977 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 ACTL7AQ9Y615 435 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 ANKDD1BA6NHY2 528 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 FPGTO14772 594 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 DCLK1O15075 740 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 CAPNS1P04632 268 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 ADORA3P0DMS8 318 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 RGS6P49758 472 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 SMN1Q16637 294 aaKnown RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 KLHL22Q53GT1 634 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 FAM76BQ5HYJ3 339 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 SLC25A25Q6KCM7 469 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 LINGO2Q7L985 606 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 B3GNT8Q7Z7M8 397 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 SIAH1Q8IUQ4 282 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 DTWD1Q8N5C7 304 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 SPATA22Q8NHS9 363 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 LHFPL5Q8TAF8 219 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 TMEM125Q96AQ2 219 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 S100A13Q99584 98 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 C7orf50Q9BRJ6 194 aaKnown RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 ZNF471Q9BX82 626 aaPredicted RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 C11orf54Q9H0W9 315 aaPredicted RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 OR51J1Q9H342 316 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 LTN1O94822 1766 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 NPEPPSL1A6NEC2 478 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 OIP5O43482 229 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 HLA-DPB1P04440 258 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 HLA-EP13747 358 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 UGT2B10P36537 528 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 POLR2IP36954 125 aaKnown RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 NFIXQ14938 502 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 TRIM40Q6P9F5 258 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 ZNF680Q8NEM1 530 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 MOSPD2Q8NHP6 518 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 SLC2A14Q8TDB8 520 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 HERVK_113Q902F9 699 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 FAM126AQ9BYI3 521 aaPredicted RBP9.98□□□□□ -0.81
CD28-202ENST00000374481 MIEF1Q9NQG6 463 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 EVA1BQ9NVM1 165 aa9.98□□□□□ -0.81
CD28-202ENST00000374481 MRC1P22897 1456 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms