RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 TRIM74Q86UV6 250 aa12.88□□□□□ -0.35
A1CF-204ENST00000373997 ZDHHC13Q8IUH4 622 aa12.88□□□□□ -0.35
A1CF-204ENST00000373997 BTN2A2Q8WVV5 523 aa12.88□□□□□ -0.35
A1CF-204ENST00000373997 HDAC2Q92769 488 aaKnown RBP12.88□□□□□ -0.35
A1CF-204ENST00000373997 TMBIM1Q969X1 311 aa12.88□□□□□ -0.35
A1CF-204ENST00000373997 PLEKHA8Q96JA3 519 aa12.88□□□□□ -0.35
A1CF-204ENST00000373997 HDAC8Q9BY41 377 aa12.88□□□□□ -0.35
A1CF-204ENST00000373997 FAM126AQ9BYI3 521 aaPredicted RBP12.88□□□□□ -0.35
A1CF-204ENST00000373997 SOX17Q9H6I2 414 aaPredicted RBP12.88□□□□□ -0.35
A1CF-204ENST00000373997 GPN2Q9H9Y4 310 aaPredicted RBP12.88□□□□□ -0.35
A1CF-204ENST00000373997 USP22Q9UPT9 525 aa12.88□□□□□ -0.35
A1CF-204ENST00000373997 AP3M1Q9Y2T2 418 aa12.88□□□□□ -0.35
A1CF-204ENST00000373997 PIAS3Q9Y6X2 628 aa12.88□□□□□ -0.35
A1CF-204ENST00000373997 TMEM265A0A087WTH1 108 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 ZSCAN9O15535 394 aaPredicted RBP12.87□□□□□ -0.35
A1CF-204ENST00000373997 GUCA1CO95843 209 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 MT-ND1P03886 318 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 S100BP04271 92 aaPredicted RBP12.87□□□□□ -0.35
A1CF-204ENST00000373997 POU3F3P20264 500 aaPredicted RBP12.87□□□□□ -0.35
A1CF-204ENST00000373997 GSTM2P28161 218 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 ERVPABLB-1P60509 514 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 HSPA14Q0VDF9 509 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 C18orf21Q32NC0 220 aaPredicted RBP12.87□□□□□ -0.35
A1CF-204ENST00000373997 TMEM52BQ4KMG9 183 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 LDLRAP1Q5SW96 308 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 KIAA1211LQ6NV74 962 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 CYP20A1Q6UW02 462 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.87□□□□□ -0.35
A1CF-204ENST00000373997 C8orf59Q8N0T1 100 aaPredicted RBP12.87□□□□□ -0.35
A1CF-204ENST00000373997 CLEC4FQ8N1N0 589 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 OR52E4Q8NGH9 312 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 SKA2Q8WVK7 121 aaPredicted RBP12.87□□□□□ -0.35
A1CF-204ENST00000373997 VPS35Q96QK1 796 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 NAA50Q9GZZ1 169 aaKnown RBP12.87□□□□□ -0.35
A1CF-204ENST00000373997 RSPH9Q9H1X1 276 aaPredicted RBP12.87□□□□□ -0.35
A1CF-204ENST00000373997 FANCEQ9HB96 536 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 SERGEFQ9UGK8 458 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 LIMD1Q9UGP4 676 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 BLOC1S6Q9UL45 172 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 ASB1Q9Y576 335 aa12.87□□□□□ -0.35
A1CF-204ENST00000373997 A0A1W2PP55 124 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 ANKRD28O15084 1053 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 DNAJB5O75953 348 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 SOD1P00441 154 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 HOXB6P17509 224 aaKnown RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 AOAHP28039 575 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 SHMT2P34897 504 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 GPR1P46091 355 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 YAP1P46937 504 aaKnown RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 GABARAPL2P60520 117 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 SMU1Q2TAY7 513 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 LETMD1Q6P1Q0 360 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 CYP2U1Q7Z449 544 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 STK32CQ86UX6 486 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 RALGPS2Q86X27 583 aaPredicted RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 RAVER1Q8IY67 606 aaKnown RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 SVOPLQ8N434 492 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 HDDC3Q8N4P3 179 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 METTL6Q8TCB7 284 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 SNRNP27Q8WVK2 155 aaKnown RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 TRUB1Q8WWH5 349 aaKnown RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 ELMO1Q92556 727 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 POP5Q969H6 163 aaKnown RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 PPM1MQ96MI6 270 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 SLC6A17Q9H1V8 727 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 KCNK12Q9HB15 430 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 USE1Q9NZ43 259 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 DNAJB9Q9UBS3 223 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 PSME2Q9UL46 239 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 SH3GLB1Q9Y371 365 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 V9GYQ6 96 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 CROCCQ5TZA2 2017 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 TMX2-CTNND1H3BSU7 103 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 SOX1O00570 391 aaPredicted RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 LSM1O15116 133 aaKnown RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 RAD51BO15315 384 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 FFAR2O15552 330 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 SGTAO43765 313 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 PCDH8O95206 1070 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 KCNH1O95259 989 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 KLF8O95600 359 aaPredicted RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 BCL10O95999 233 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 ADH1BP00325 375 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 ASGR2P07307 311 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 CAPN1P07384 714 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 G6PDP11413 515 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 CD247P20963 164 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 MATN1P21941 496 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 CRHBPP24387 322 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 ELK4P28324 431 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 PBLDP30039 288 aaPredicted RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 NTSR1P30989 418 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 SOX11P35716 441 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 POLR2IP36954 125 aaKnown RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 CD97P48960 835 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 CTSCP53634 463 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 BNIP3Q12983 259 aa12.86□□□□□ -0.35
A1CF-204ENST00000373997 TOP3AQ13472 1001 aaPredicted RBP12.86□□□□□ -0.35
A1CF-204ENST00000373997 NR6A1Q15406 480 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms