RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 STOX2Q9P2F5 926 aaPredicted RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 FAM8A1Q9UBU6 413 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF282Q9UDV7 671 aaPredicted RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 PACSIN3Q9UKS6 424 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 CNOT6Q9ULM6 557 aaKnown RBP8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 PCDHGB4Q9UN71 923 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 AURKCQ9UQB9 309 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 HSPE1-MOB4S4R3N1 261 aa8.45□□□□□ -1.06
SNRNP40-202ENST00000373720 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ASPDHA6ND91 283 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TBC1D3BA6NDS4 549 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 A8MVJ9 347 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ARHGEF33A8MVX0 844 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 FADS2P1A8MWK0 482 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TXNDC9O14530 226 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 SORBS2O94875 1100 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ERGP11308 486 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 C6P13671 934 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 CDH2P19022 906 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 EPORP19235 508 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 NDUFS1P28331 727 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TRIM23P36406 574 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 MTHFRP42898 656 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TSFMP43897 325 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 HTR6P50406 440 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ALDH3A2P51648 485 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TRA2BP62995 288 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 CSNK2BP67870 215 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 VAC14Q08AM6 782 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 MERTKQ12866 999 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 FADDQ13158 208 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 DYNC1I2Q13409 638 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TOP3AQ13472 1001 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 CAMK2GQ13555 558 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF234Q14588 700 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 LRRC36Q1X8D7 754 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ITPRIPL2Q3MIP1 535 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 RAET1GQ6H3X3 334 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 PATL1Q86TB9 770 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 LRRTM4Q86VH4 590 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 AMZ2Q86W34 360 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 SYT12Q8IV01 421 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 CHERPQ8IWX8 916 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 DHRSXQ8N5I4 330 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 NAT16Q8N8M0 369 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF548Q8NEK5 533 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 CHTF18Q8WVB6 975 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 SCAMP4Q969E2 229 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 NXPE3Q969Y0 559 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ESAMQ96AP7 390 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 MRPL38Q96DV4 380 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 FAM120BQ96EK7 910 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TEX37Q96LM6 180 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 NECTIN4Q96NY8 510 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TSC22D3Q99576 134 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 RBM4BQ9BQ04 359 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TUBA1CQ9BQE3 449 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TIMM29Q9BSF4 260 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 C1orf50Q9BV19 199 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 RBM4Q9BWF3 364 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 CHID1Q9BWS9 393 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TEX101Q9BY14 249 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ASPSCR1Q9BZE9 553 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 PAIP1Q9H074 479 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 RHBGQ9H310 441 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 CCDC177Q9NQR7 707 aaPredicted RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 DCAF13Q9NV06 445 aaKnown RBP8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ENOPH1Q9UHY7 261 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ATP6V1HQ9UI12 483 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 C3orf18Q9UK00 162 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ADAM29Q9UKF5 820 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 BAG5Q9UL15 447 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 BLOC1S6Q9UL45 172 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ASB1Q9Y576 335 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 PCDHGA2Q9Y5H1 932 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 ORC6Q9Y5N6 252 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 FADS3Q9Y5Q0 445 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 HEBP2Q9Y5Z4 205 aa8.44□□□□□ -1.06
SNRNP40-202ENST00000373720 TRIM64A6NGJ6 449 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 A8MX80 341 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 CXCR6O00574 342 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 SCAMP3O14828 347 aaKnown RBP8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 GPR39O43194 453 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 LILRB5O75023 590 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 GUCY1B2O75343 617 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 EPN2O95208 641 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 KAT7O95251 611 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 BMP10O95393 424 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 GLULP15104 373 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 SDC1P18827 310 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 ATP6V1B2P21281 511 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 ACADLP28330 430 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 IMPA1P29218 277 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 IRS1P35568 1242 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 GDF5P43026 501 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 RPS9P46781 194 aaKnown RBP8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 RAD23AP54725 363 aa8.43□□□□□ -1.06
SNRNP40-202ENST00000373720 RPS21P63220 83 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms