RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 GCNT7Q6ZNI0 430 aa17.3■□□□□ 0.36
CTSA-204ENST00000372484 SLCO4C1Q6ZQN7 724 aa17.3■□□□□ 0.36
CTSA-204ENST00000372484 FAM83HQ6ZRV2 1179 aaPredicted RBP17.3■□□□□ 0.36
CTSA-204ENST00000372484 CBR4Q8N4T8 237 aa17.3■□□□□ 0.36
CTSA-204ENST00000372484 PHC3Q8NDX5 983 aa17.3■□□□□ 0.36
CTSA-204ENST00000372484 ZNF548Q8NEK5 533 aaPredicted RBP17.3■□□□□ 0.36
CTSA-204ENST00000372484 SPDYE1Q8NFV5 336 aaPredicted RBP17.3■□□□□ 0.36
CTSA-204ENST00000372484 ELSPBP1Q96BH3 223 aa17.3■□□□□ 0.36
CTSA-204ENST00000372484 GBP5Q96PP8 586 aa17.3■□□□□ 0.36
CTSA-204ENST00000372484 CENPKQ9BS16 269 aa17.3■□□□□ 0.36
CTSA-204ENST00000372484 INPP5KQ9BT40 448 aa17.3■□□□□ 0.36
CTSA-204ENST00000372484 TBCDQ9BTW9 1192 aa17.3■□□□□ 0.36
CTSA-204ENST00000372484 AP3M1Q9Y2T2 418 aa17.3■□□□□ 0.36
CTSA-204ENST00000372484 PCYT1BQ9Y5K3 369 aaPredicted RBP17.3■□□□□ 0.36
CTSA-204ENST00000372484 DOCK9Q9BZ29 2069 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 ARHGAP10A1A4S6 786 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 PDLIM1O00151 329 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 SH3BGRLO75368 114 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 B3GALT4O96024 378 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 GSNP06396 782 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 NPPBP16860 134 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 ACADLP28330 430 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 KIR3DL1P43629 444 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 TAS2R38P59533 333 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 AGBL4Q5VU57 503 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 OR4F3Q6IEY1 312 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 EPHX4Q8IUS5 362 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 PHACTR4Q8IZ21 702 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 PACRGLQ8N7B6 248 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 ZNF513Q8N8E2 541 aaPredicted RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 HUS1BQ8NHY5 278 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 AURKBQ96GD4 344 aaPredicted RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 C9orf16Q9BUW7 83 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 CHID1Q9BWS9 393 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 RSPH9Q9H1X1 276 aaPredicted RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 KAT8Q9H7Z6 458 aaKnown RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 ITM2CQ9NQX7 267 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 OAZ3Q9UMX2 235 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 DYRK1BQ9Y463 629 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 NUP214P35658 2090 aaPredicted RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 CKAP5Q14008 2032 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 RNF103-CHMP3A0A140T963 221 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 ELOVL7A1L3X0 281 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 RFXANKO14593 260 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 MYO1DO94832 1006 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 ETHE1O95571 254 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 CDH1P12830 882 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 LAMP2P13473 410 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 CDK3Q00526 305 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 MAP7Q14244 749 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 SF1Q15637 639 aaKnown RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 DPY19L1Q2PZI1 675 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 CATSPEREQ5SY80 951 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 ATG9BQ674R7 924 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 MED27Q6P2C8 311 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 ISLR2Q6UXK2 745 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 AMZ2Q86W34 360 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 LMNTD1Q8N9Z9 388 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 CDC26Q8NHZ8 85 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 METTL2AQ96IZ6 378 aaKnown RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 HHIPQ96QV1 700 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 RPP25Q9BUL9 199 aaKnown RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 TRMT61BQ9BVS5 477 aaKnown RBP17.29■□□□□ 0.36
CTSA-204ENST00000372484 SGPP1Q9BX95 441 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 ZDHHC5Q9C0B5 715 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 GORASP2Q9H8Y8 452 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 ASF1AQ9Y294 204 aa17.29■□□□□ 0.36
CTSA-204ENST00000372484 PRMT3O60678 531 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 LDLRP01130 860 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 CDKN2CP42773 168 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 SOX9P48436 509 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 TAP2Q03519 686 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 E2F2Q14209 437 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 RAB30Q15771 203 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 ATP6AP1Q15904 470 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 WSCD2Q2TBF2 565 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 MSANTD1Q6ZTZ1 278 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 OR7A2PQ8NGA2 310 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 REPS1Q96D71 796 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 CPPED1Q9BRF8 314 aaPredicted RBP17.28■□□□□ 0.36
CTSA-204ENST00000372484 LGR4Q9BXB1 951 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 OR52A5Q9H2C5 316 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 SH2B3Q9UQQ2 575 aa17.28■□□□□ 0.36
CTSA-204ENST00000372484 FAM58BPP0C7Q3 252 aa17.27■□□□□ 0.36
CTSA-204ENST00000372484 COX7A2P14406 83 aa17.27■□□□□ 0.36
CTSA-204ENST00000372484 PNLIPRP1P54315 467 aa17.27■□□□□ 0.36
CTSA-204ENST00000372484 SRSF11Q05519 484 aaKnown RBP17.27■□□□□ 0.36
CTSA-204ENST00000372484 MTAPQ13126 283 aa17.27■□□□□ 0.36
CTSA-204ENST00000372484 CAMK2GQ13555 558 aaPredicted RBP17.27■□□□□ 0.36
CTSA-204ENST00000372484 ENPP2Q13822 863 aa17.27■□□□□ 0.36
CTSA-204ENST00000372484 UGT8Q16880 541 aa17.27■□□□□ 0.36
CTSA-204ENST00000372484 FAM98BQ52LJ0 330 aaKnown RBP17.27■□□□□ 0.36
CTSA-204ENST00000372484 TMTC4Q5T4D3 741 aa17.27■□□□□ 0.36
CTSA-204ENST00000372484 CES5AQ6NT32 575 aa17.27■□□□□ 0.36
CTSA-204ENST00000372484 UNC5DQ6UXZ4 953 aa17.27■□□□□ 0.36
CTSA-204ENST00000372484 LRRTM4Q86VH4 590 aa17.27■□□□□ 0.36
CTSA-204ENST00000372484 CHERPQ8IWX8 916 aaKnown RBP17.27■□□□□ 0.36
CTSA-204ENST00000372484 HDDC3Q8N4P3 179 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms