RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 C11orf91Q3C1V1 193 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 GRHL2Q6ISB3 625 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 TMEM220Q6QAJ8 160 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 KCTD8Q6ZWB6 473 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 THAP5Q7Z6K1 395 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 OR5K1Q8NHB7 308 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 CXorf21Q9HAI6 301 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 FAM118AQ9NWS6 357 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 ITM2BQ9Y287 266 aa28.03■■■□□ 2.08
SSBP3-204ENST00000371320 FGBP02675 491 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 SRPRAP08240 638 aaKnown RBP28.02■■■□□ 2.08
SSBP3-204ENST00000371320 EPCAMP16422 314 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 ACSM2AQ08AH3 577 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 DHCR24Q15392 516 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 ACSM2BQ68CK6 577 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 PARS2Q7L3T8 475 aaKnown RBP28.02■■■□□ 2.08
SSBP3-204ENST00000371320 ZNF551Q7Z340 670 aaPredicted RBP28.02■■■□□ 2.08
SSBP3-204ENST00000371320 SERPINA11Q86U17 422 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 C8orf59Q8N0T1 100 aaPredicted RBP28.02■■■□□ 2.08
SSBP3-204ENST00000371320 ZNF555Q8NEP9 628 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 PJA1Q8NG27 643 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 CDC26Q8NHZ8 85 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 FOPNLQ96NB1 174 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 OR4K3Q96R72 315 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 FBXO10Q9UK96 956 aa28.02■■■□□ 2.08
SSBP3-204ENST00000371320 MTCL1Q9Y4B5 1905 aaKnown RBP28.02■■■□□ 2.08
SSBP3-204ENST00000371320 H0YIV9 168 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 ZNF701M0R085 212 aaPredicted RBP28.01■■■□□ 2.07
SSBP3-204ENST00000371320 CLIC1O00299 241 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 CCNDBP1O95273 360 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 EEF1B2P24534 225 aaKnown RBP28.01■■■□□ 2.07
SSBP3-204ENST00000371320 PBLDP30039 288 aaPredicted RBP28.01■■■□□ 2.07
SSBP3-204ENST00000371320 TTKP33981 857 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 PPP1R8Q12972 351 aaKnown RBP28.01■■■□□ 2.07
SSBP3-204ENST00000371320 ZNF697Q5TEC3 545 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 CHST15Q7LFX5 561 aaPredicted RBP28.01■■■□□ 2.07
SSBP3-204ENST00000371320 MBOAT4Q96T53 435 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 PKP4Q99569 1192 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 WRAP53Q9BUR4 548 aaKnown RBP28.01■■■□□ 2.07
SSBP3-204ENST00000371320 SGK2Q9HBY8 427 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 EBF1Q9UH73 591 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 MYO1DO94832 1006 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 SLC16A8O95907 504 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 ENGP17813 658 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 HOXA9P31269 272 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 DCTP40126 519 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 GJA8P48165 433 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 ZCCHC8Q6NZY4 707 aaKnown RBP28.01■■■□□ 2.07
SSBP3-204ENST00000371320 NRSN1Q8IZ57 195 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 OR10Q1Q8NGQ4 319 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 SPPL3Q8TCT6 385 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 DTNBP1Q96EV8 351 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 PRM3Q9NNZ6 103 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 AASDHPPTQ9NRN7 309 aa28.01■■■□□ 2.07
SSBP3-204ENST00000371320 CXXC1Q9P0U4 656 aaPredicted RBP28.01■■■□□ 2.07
SSBP3-204ENST00000371320 SAMD4AQ9UPU9 718 aaKnown RBP28.01■■■□□ 2.07
SSBP3-204ENST00000371320 KPNA3O00505 521 aaPredicted RBP28■■■□□ 2.07
SSBP3-204ENST00000371320 CISD3P0C7P0 127 aa28■■■□□ 2.07
SSBP3-204ENST00000371320 IMPA1P29218 277 aa28■■■□□ 2.07
SSBP3-204ENST00000371320 WNT3P56703 355 aa28■■■□□ 2.07
SSBP3-204ENST00000371320 ST8SIA6P61647 398 aa28■■■□□ 2.07
SSBP3-204ENST00000371320 RAB39AQ14964 217 aa28■■■□□ 2.07
SSBP3-204ENST00000371320 ZNF621Q6ZSS3 439 aa28■■■□□ 2.07
SSBP3-204ENST00000371320 TMEM179BQ7Z7N9 219 aa28■■■□□ 2.07
SSBP3-204ENST00000371320 KLHDC8AQ8IYD2 350 aa28■■■□□ 2.07
SSBP3-204ENST00000371320 FAM120CQ9NX05 1096 aaKnown RBP28■■■□□ 2.07
SSBP3-204ENST00000371320 EPN2O95208 641 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 HSD3B1P14060 373 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 CEBPBP17676 345 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 HSD3B2P26439 372 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 PDHA2P29803 388 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 MAPK9P45984 424 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 VASPP50552 380 aaPredicted RBP27.99■■■□□ 2.07
SSBP3-204ENST00000371320 TPD52P55327 224 aaPredicted RBP27.99■■■□□ 2.07
SSBP3-204ENST00000371320 SPIDRQ14159 915 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 SF1Q15637 639 aaKnown RBP27.99■■■□□ 2.07
SSBP3-204ENST00000371320 ANKRD34AQ69YU3 496 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 OR8J2Q8NGG1 315 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 OR56A3Q8NH54 315 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 AMBRA1Q9C0C7 1298 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 BRF2Q9HAW0 419 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 CDC14AQ9UNH5 594 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 B4GAT1O43505 415 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 HS6ST1O60243 411 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 SCN2BO60939 215 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 ZNF682O95780 498 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 HNRNPA1P09651 372 aaKnown RBP eCLIP27.99■■■□□ 2.07
SSBP3-204ENST00000371320 ZNF773Q6PK81 442 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 C12orf43Q96C57 262 aaKnown RBP27.99■■■□□ 2.07
SSBP3-204ENST00000371320 RAD9AQ99638 391 aa27.99■■■□□ 2.07
SSBP3-204ENST00000371320 MAGEB17A8MXT2 336 aa27.98■■■□□ 2.07
SSBP3-204ENST00000371320 CPSF4O95639 269 aaKnown RBP27.98■■■□□ 2.07
SSBP3-204ENST00000371320 C1QCP02747 245 aa27.98■■■□□ 2.07
SSBP3-204ENST00000371320 CYP17A1P05093 508 aa27.98■■■□□ 2.07
SSBP3-204ENST00000371320 ADH5P11766 374 aa27.98■■■□□ 2.07
SSBP3-204ENST00000371320 PRKACGP22612 351 aa27.98■■■□□ 2.07
SSBP3-204ENST00000371320 NEDD8Q15843 81 aa27.98■■■□□ 2.07
SSBP3-204ENST00000371320 LRRC23Q53EV4 343 aaPredicted RBP27.98■■■□□ 2.07
SSBP3-204ENST00000371320 HIPK1Q86Z02 1210 aa27.98■■■□□ 2.07
SSBP3-204ENST00000371320 ZDHHC21Q8IVQ6 265 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms