RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 KLK4Q9Y5K2 254 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 ACACAQ13085 2346 aa14.24□□□□□ -0.13
COL9A1-204ENST00000370496 IGKV1-8A0A0C4DH67 115 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 A0A0J9YVX5 310 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 OR2A25A4D2G3 310 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.23□□□□□ -0.13
COL9A1-204ENST00000370496 ZSCAN9O15535 394 aaPredicted RBP14.23□□□□□ -0.13
COL9A1-204ENST00000370496 KLK10O43240 276 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 RAD1O60671 282 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 IPO13O94829 963 aaKnown RBP14.23□□□□□ -0.13
COL9A1-204ENST00000370496 WDR47O94967 919 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 DLGAP3O95886 979 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 NUDT17P0C025 328 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 CDH1P12830 882 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 EZRP15311 586 aaKnown RBP14.23□□□□□ -0.13
COL9A1-204ENST00000370496 ZNF28P17035 718 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 ACAP2Q15057 778 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 SULT1C3Q6IMI6 304 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 RNF44Q7L0R7 432 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 ISCA2Q86U28 154 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 THOC6Q86W42 341 aaKnown RBP14.23□□□□□ -0.13
COL9A1-204ENST00000370496 PAQR7Q86WK9 346 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 NLGN4XQ8N0W4 816 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 DNAJC22Q8N4W6 341 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 IL22RA1Q8N6P7 574 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 GALNT6Q8NCL4 622 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 NLGN4YQ8NFZ3 816 aaPredicted RBP14.23□□□□□ -0.13
COL9A1-204ENST00000370496 RHEBL1Q8TAI7 183 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 RHBDF1Q96CC6 855 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 CLIP3Q96DZ5 547 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 SCYL1Q96KG9 808 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 FCRL4Q96PJ5 515 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 ZFYVE21Q9BQ24 234 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 PLCD4Q9BRC7 762 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 SNX7Q9UNH6 387 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 SH2B3Q9UQQ2 575 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 HEATR5BQ9P2D3 2071 aa14.23□□□□□ -0.13
COL9A1-204ENST00000370496 TPRP12270 2363 aaKnown RBP14.23□□□□□ -0.13
COL9A1-204ENST00000370496 TEX51A0A1B0GUA7 166 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 CCDC189A1A4V9 331 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 UBXN8O00124 270 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TAF4O00268 1085 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 HCRTR1O43613 425 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 CTSVO60911 334 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 CDH16O75309 829 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 COL6A2P12110 1019 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 GFAPP14136 432 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 KRT15P19012 456 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 HRH2P25021 359 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 GRK3P35626 688 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 GABRA4P48169 554 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 CLN3Q13286 438 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TGIF1Q15583 401 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 C18orf21Q32NC0 220 aaPredicted RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TECRLQ5HYJ1 363 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 CDKL4Q5MAI5 379 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 BROXQ5VW32 411 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 ZNF425Q6IV72 752 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 C6orf15Q6UXA7 325 aaPredicted RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TMPRSS11BQ86T26 416 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TDRPQ86YL5 185 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 MCATQ8IVS2 390 aaKnown RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 CACNA2D3Q8IZS8 1091 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 PLD6Q8N2A8 252 aaKnown RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 ESX1Q8N693 406 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 OR2W6PQ8NHA6 318 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 SLC5A11Q8WWX8 675 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 RERGQ96A58 199 aaPredicted RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 ATOH8Q96SQ7 321 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TMEM79Q9BSE2 394 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 DPH1Q9BZG8 443 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 ACTR5Q9H9F9 607 aaPredicted RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 XPR1Q9UBH6 696 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 PILRAQ9UKJ1 303 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 PCDHB3Q9Y5E6 796 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 CELSR3Q9NYQ7 3312 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 H7BY64 318 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 GOLGA8RI6L899 631 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 HAT1O14929 419 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 ERLIN1O75477 346 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 RFPL1O75677 317 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 MT-ND3P03897 115 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 NTRK1P04629 796 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 SLC6A12P48065 614 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 HSPA7P48741 367 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 VSX2P58304 361 aaPredicted RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 MAP7Q14244 749 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 ZXDCQ2QGD7 858 aaPredicted RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 FBXO48Q5FWF7 155 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TCTE1Q5JU00 501 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 MANEAQ5SRI9 462 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 PRAMEF17Q5VTA0 474 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TLDC1Q6P9B6 456 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TIFABQ6ZNK6 161 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 SPACA3Q8IXA5 215 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 MREGQ8N565 214 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 ZNF655Q8N720 491 aaPredicted RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 SNX31Q8N9S9 440 aa14.22□□□□□ -0.13
COL9A1-204ENST00000370496 TTC29Q8NA56 475 aaPredicted RBP14.22□□□□□ -0.13
COL9A1-204ENST00000370496 PRAP1Q96NZ9 151 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms