RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 GNG8Q9UK08 70 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 CSTBP04080 98 aaKnown RBP12.17□□□□□ -0.46
HCFC1-202ENST00000369984 SLC1A2P43004 574 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 SLC15A1P46059 708 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 CLCNKBP51801 687 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 PTF1AQ7RTS3 328 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 COQ8AQ8NI60 647 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 OVCA2Q8WZ82 227 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 TRMT61BQ9BVS5 477 aaKnown RBP12.17□□□□□ -0.46
HCFC1-202ENST00000369984 FAM83DQ9H4H8 585 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 FLRT1Q9NZU1 646 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 LMTK2Q8IWU2 1503 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 BRCC3P46736 316 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 E2F1Q01094 437 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 GPR68Q15743 365 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 FAM189A2Q15884 450 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 ZNF565Q8N9K5 539 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 TTYH2Q9BSA4 534 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 CDK5RAP2Q96SN8 1893 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 CILPO75339 1184 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 RP2O75695 350 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 SNAPC5O75971 98 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 RAB39AQ14964 217 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 TPRG1LQ5T0D9 272 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 CCDC28AQ8IWP9 274 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 PYROXD2Q8N2H3 581 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 GALNT11Q8NCW6 608 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 NCSTNQ92542 709 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 YIPF4Q9BSR8 244 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 NDC1Q9BTX1 674 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 ITPAQ9BY32 194 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 SCDO00767 359 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 PCDH7O60245 1069 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 POP4O95707 220 aaKnown RBP12.17□□□□□ -0.46
HCFC1-202ENST00000369984 WASP42768 502 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 CAMK1GQ96NX5 476 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 C14orf105Q9NVL8 296 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 A0A1W2PRQ8 180 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 CCDC85CA6NKD9 419 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 H3BSH0 61 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 C4BPAP04003 597 aaKnown RBP12.17□□□□□ -0.46
HCFC1-202ENST00000369984 S100PP25815 95 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 ACADVLP49748 655 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 FKBP1CQ5VVH2 108 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 TMEM145Q8NBT3 493 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 IRGQQ8WZA9 623 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 WACQ9BTA9 647 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 SMIM35A0A1B0GVV1 85 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 PDLIM1O00151 329 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 SNX29P2Q8IUI4 249 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 C9orf43Q8TAL5 461 aaPredicted RBP12.17□□□□□ -0.46
HCFC1-202ENST00000369984 S100A16Q96FQ6 103 aaKnown RBP12.17□□□□□ -0.46
HCFC1-202ENST00000369984 LRRC46Q96FV0 321 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 FZD4Q9ULV1 537 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 PCDHGC4Q9Y5F7 938 aa12.17□□□□□ -0.46
HCFC1-202ENST00000369984 A0A0G2JMP0 313 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 ERVK-8P63133 956 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 CD47Q08722 323 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 AIMP2Q13155 320 aaKnown RBP12.16□□□□□ -0.46
HCFC1-202ENST00000369984 CDK10Q15131 360 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TBRG1Q3YBR2 411 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 JAGN1Q8N5M9 183 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 OR4M2Q8NGB6 313 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 SLC30A2Q9BRI3 323 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 SPATA7Q9P0W8 599 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 FBXL3Q9UKT7 428 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 YARS2Q9Y2Z4 477 aaKnown RBP12.16□□□□□ -0.46
HCFC1-202ENST00000369984 KIDINS220Q9ULH0 1771 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TEX13CA0A0J9YWL9 993 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 HYKKA2RU49 373 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 CXCR1P25024 350 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 FNTBP49356 437 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 DUS1LQ6P1R4 473 aaKnown RBP12.16□□□□□ -0.46
HCFC1-202ENST00000369984 DGAT2Q96PD7 388 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TAS2R3Q9NYW6 316 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 GSKIPQ9P0R6 139 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 FZD10Q9ULW2 581 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 FCF1Q9Y324 198 aaKnown RBP12.16□□□□□ -0.46
HCFC1-202ENST00000369984 PCDHGB2Q9Y5G2 931 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TGFB1I1O43294 461 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 PBX3P40426 434 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 ZBED5Q49AG3 693 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 DACT2Q5SW24 774 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TSTD2Q5T7W7 516 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TIGD4Q8IY51 512 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 ASB9Q96DX5 294 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TBL1XR1Q9BZK7 514 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 SDCBP2Q9H190 292 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TLR4O00206 839 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TULP2O00295 520 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 NFATC1O95644 943 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 JAM2P57087 298 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 ARL9Q6T311 187 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 BEND4Q6ZU67 534 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 USP50Q70EL3 339 aaPredicted RBP12.16□□□□□ -0.46
HCFC1-202ENST00000369984 SLC16A9Q7RTY1 509 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 SLC44A3Q8N4M1 653 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TTLQ8NG68 377 aa12.16□□□□□ -0.46
HCFC1-202ENST00000369984 TRPM4Q8TD43 1214 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms