RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 SPO11Q9Y5K1 396 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 GPC6Q9Y625 555 aaPredicted RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 PRR23D1E9PI22 279 aaPredicted RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 NPIPB8E9PQR5 432 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 ORC5O43913 435 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 PRR23D2P0DMB1 279 aaPredicted RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 CENPAP49450 140 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 DSTNP60981 165 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 PPP3R1P63098 170 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 ACTC1P68032 377 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 ACTA1P68133 377 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 SGCGQ13326 291 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 TBCEQ15813 527 aaPredicted RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 TRAF7Q6Q0C0 670 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 FAM151BQ6UXP7 276 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 AGMOQ6ZNB7 445 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 GNPDA2Q8TDQ7 276 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 FUBP1Q96AE4 644 aaKnown RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 MED8Q96G25 268 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 VMP1Q96GC9 406 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 OR2B2Q9GZK3 357 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 CLMPQ9H6B4 373 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 FAM118AQ9NWS6 357 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 EHD3Q9NZN3 535 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 DNAJC15Q9Y5T4 150 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 FOXE1O00358 373 aaPredicted RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 DLGAP1O14490 977 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 CASC3O15234 703 aaKnown RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 SNX4O95219 450 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 CPNE6O95741 557 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 ETV6P41212 452 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 VASPP50552 380 aaPredicted RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 RAB39AQ14964 217 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 HKDC1Q2TB90 917 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 FAM220AQ7Z4H9 259 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 RNF148Q8N7C7 305 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 FIBINQ8TAL6 211 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 KHSRPQ92945 711 aaKnown RBP eCLIP7.1□□□□□ -1.273e-7■■■■□ 23.2
VTA1-202ENST00000367630 LPPQ93052 612 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 AP2M1Q96CW1 435 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 NPLQ9BXD5 320 aaPredicted RBP7.1□□□□□ -1.27
VTA1-202ENST00000367630 DZANK1Q9NVP4 752 aa7.1□□□□□ -1.27
VTA1-202ENST00000367630 ADAMTSL1Q8N6G6 1762 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.09□□□□□ -1.27
VTA1-202ENST00000367630 CENPBD1B2RD01 187 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 HCN1O60741 890 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 BUD31P41223 144 aaPredicted RBP7.09□□□□□ -1.27
VTA1-202ENST00000367630 CD97P48960 835 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 RAB33AQ14088 237 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 NPTX1Q15818 432 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 EGFLAMQ63HQ2 1017 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 C22orf39Q6P5X5 142 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 SYVN1Q86TM6 617 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 DCUN1D3Q8IWE4 304 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 NPLOC4Q8TAT6 608 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 SMPDL3AQ92484 453 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 LYSMD1Q96S90 227 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 ACTR6Q9GZN1 396 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 A0A1W2PRB8 838 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 FAM172BPA6NC97 362 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 FAM47E-STBD1D6RA91 191 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 PPEF2O14830 753 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 SPTLC1O15269 473 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 GADD45GO95257 159 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 ZBTB11O95625 1053 aaPredicted RBP7.09□□□□□ -1.27
VTA1-202ENST00000367630 IGLV3-27P01718 113 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 SLC10A3P09131 477 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 UGT1A5P35504 534 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 C21orf58P58505 322 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 MAXP61244 160 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 FAM189BP81408 668 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 PRKCDQ05655 676 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 MGAT3Q09327 533 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 SNAP47Q5SQN1 464 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 GDF6Q6KF10 455 aaPredicted RBP7.09□□□□□ -1.27
VTA1-202ENST00000367630 NAPRTQ6XQN6 538 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 HSDL2Q6YN16 418 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 LAPTM4BQ86VI4 370 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 TCEAL8Q8IYN2 117 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 OR8H2Q8N162 312 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 PSD4Q8NDX1 1056 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 OR52N2Q8NGI0 321 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 OR10A6Q8NH74 314 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 DACT3Q96B18 629 aaPredicted RBP7.09□□□□□ -1.27
VTA1-202ENST00000367630 TMEM80Q96HE8 168 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 SLC35G5Q96KT7 338 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 LRFN5Q96NI6 719 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 MED17Q9NVC6 651 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 IL36AQ9UHA7 158 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 EGFL7Q9UHF1 273 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 PIPP12273 146 aaPredicted RBP7.09□□□□□ -1.27
VTA1-202ENST00000367630 TSFMP43897 325 aaKnown RBP7.09□□□□□ -1.27
VTA1-202ENST00000367630 HSPA7P48741 367 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 CBX3Q13185 183 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 KCTD19Q17RG1 926 aaPredicted RBP7.09□□□□□ -1.27
VTA1-202ENST00000367630 PIH1D2Q8WWB5 315 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 PIP5K1AQ99755 562 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 GOLGA2P5Q9HBQ8 144 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 ISYNA1Q9NPH2 558 aa7.09□□□□□ -1.27
VTA1-202ENST00000367630 PIH1D1Q9NWS0 290 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms