RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CREBL2O60519 120 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ADAM23O75077 832 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SERPINA5P05154 406 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 AGAP6Q5VW22 663 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FAM124AQ86V42 546 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 DNAJC10Q8IXB1 793 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 DEFB107AQ8IZN7 70 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ARL14EPQ8N8R7 260 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FBXO25Q8TCJ0 367 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FBXL8Q96CD0 374 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MOCOSQ96EN8 888 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 AGAP4Q96P64 663 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 LYSMD1Q96S90 227 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PRRT1Q99946 306 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 OLAHQ9NV23 265 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ENDOD1O94919 500 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ALX3O95076 343 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SLC2A1P11166 492 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NR6A1Q15406 480 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 DNM1P34Q6PK57 102 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 Q6ZNX1 250 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NOXA1Q86UR1 476 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 C4orf33Q8N1A6 199 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 LRIG1Q96JA1 1093 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SMCO4Q9NRQ5 59 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NOP16Q9Y3C1 178 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FAM234BA2RU67 622 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RAB40ALP0C0E4 278 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 UROSP10746 265 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ADRA1DP25100 572 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 POLR2JP52435 117 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NCOA4Q13772 614 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RAB40AQ8WXH6 277 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF577Q9BSK1 485 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 DHRS4Q9BTZ2 278 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NELFAQ9H3P2 528 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SEMA3GQ9NS98 782 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 GPATCH2LQ9NWQ4 482 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PCCBP05166 539 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RAB3BP20337 219 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 GTF2BQ00403 316 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CTU2Q2VPK5 515 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 WDR74Q6RFH5 385 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TMEM270Q6UE05 265 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PDZD9Q8IXQ8 264 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TRIB2Q92519 343 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CBWD1Q9BRT8 395 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PRDM12Q9H4Q4 367 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SETD1AO15047 1707 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF99A8MXY4 864 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF7P17097 686 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 VAMP1P23763 118 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 GBX2P52951 348 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 N4BP2L1Q5TBK1 243 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 H3F3CQ6NXT2 135 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 DNAJB14Q8TBM8 379 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PCDHA8Q9Y5H6 950 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 NCF1BA6NI72 391 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 USP17L15C9J2P7 530 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 USP17L13C9JLJ4 530 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 USP17L11C9JVI0 530 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 USP17L18D6R9N7 530 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 USP17L22D6RA61 530 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 USP17L17D6RBQ6 530 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 USP17L19D6RCP7 530 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 USP17L20D6RJB6 530 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 SLC34A2O95436 690 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RAB6AP20340 208 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 USP17L24Q0WX57 530 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 DYRK1AQ13627 763 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CYP27C1Q4G0S4 372 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 KIAA1614Q5VZ46 1190 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZC3H14Q6PJT7 736 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF341Q9BYN7 854 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ARHGAP39Q9C0H5 1083 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 GORASP2Q9H8Y8 452 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CNTNAP5Q8WYK1 1306 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MGAT4DA6NG13 374 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 E5RGE8 158 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 BDNFP23560 247 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 PRKCHP24723 683 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 WNT7BP56706 349 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 STK11Q15831 433 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FAM83CQ9BQN1 747 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 RAB3DO95716 219 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 MMP7P09237 267 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ARHGAP1Q07960 439 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 GRIK5Q16478 980 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 GSX2Q9BZM3 304 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TTYH3Q9C0H2 523 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FN3KRPQ9HA64 309 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 HEBP2Q9Y5Z4 205 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CROCC2H7BZ55 1655 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 METTL18O95568 372 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 TCEA1P23193 301 aaKnown RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 IGFBP5P24593 272 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 IVDP26440 423 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 CDH5P33151 784 aaPredicted RBP3.67□□□□□ -1.82
SYNE1-207ENST00000367255 FPGSQ05932 587 aa3.67□□□□□ -1.82
SYNE1-207ENST00000367255 ZNF543Q08ER8 600 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms