RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 DMRTB1Q96MA1 342 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 TM6SF2Q9BZW4 377 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 P2RY12Q9H244 342 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 CPNE5Q9HCH3 593 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 PRM3Q9NNZ6 103 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 RIMKLBQ9ULI2 386 aa13.2□□□□□ -0.3
PRKN-205ENST00000366897 CCNKO75909 580 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 PRAMEF1O95521 474 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 FABP3P05413 133 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 ABCB1P08183 1280 aaPredicted RBP13.19□□□□□ -0.3
PRKN-205ENST00000366897 IRF1P10914 325 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 DNAJA1P31689 397 aaKnown RBP13.19□□□□□ -0.3
PRKN-205ENST00000366897 MAGEA2P43356 314 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 MAPKAPK2P49137 400 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 IRF5Q13568 498 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 KEAP1Q14145 624 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 PLEKHG6Q3KR16 790 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 CYP27C1Q4G0S4 372 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 EFHD2Q96C19 240 aaPredicted RBP13.19□□□□□ -0.3
PRKN-205ENST00000366897 FAM126AQ9BYI3 521 aaPredicted RBP13.19□□□□□ -0.3
PRKN-205ENST00000366897 CD244Q9BZW8 370 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 NACA2Q9H009 215 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 ERVK13-1Q9NX77 482 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 VPS9D1Q9Y2B5 631 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 IFT52Q9Y366 437 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 TESMINQ9Y4I5 508 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 SLC28A1O00337 649 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 ERN1O75460 977 aaKnown RBP13.19□□□□□ -0.3
PRKN-205ENST00000366897 MFN2O95140 757 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 ENGP17813 658 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 FPR1P21462 350 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 S100A1P23297 94 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 CTSKP43235 329 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 PPP3CCP48454 512 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 CYP2U1Q7Z449 544 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 MRPL10Q7Z7H8 261 aaKnown RBP13.19□□□□□ -0.3
PRKN-205ENST00000366897 GLB1L3Q8NCI6 653 aaPredicted RBP13.19□□□□□ -0.3
PRKN-205ENST00000366897 SKA2Q8WVK7 121 aaPredicted RBP13.19□□□□□ -0.3
PRKN-205ENST00000366897 KCNS3Q9BQ31 491 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 KCNH6Q9H252 994 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 TM9SF3Q9HD45 589 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 GKN1Q9NS71 199 aa13.19□□□□□ -0.3
PRKN-205ENST00000366897 A0A0U1RQF3 1178 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 GJB5O95377 273 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 OPN1SWP03999 348 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 EPB42P16452 691 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 SDC1P18827 310 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 RACK1P63244 317 aaKnown RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 ABHD18Q0P651 414 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 CTXN3Q4LDR2 81 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 ARMC12Q5T9G4 340 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 NXNL2Q5VZ03 156 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 TSPYL5Q86VY4 417 aaPredicted RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 PDLIM5Q96HC4 596 aaKnown RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 PANX1Q96RD7 426 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 BCL7BQ9BQE9 202 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 KATNAL1Q9BW62 490 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 EMILIN2Q9BXX0 1053 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 RUBCNLQ9H714 662 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 REEP1Q9H902 201 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 SP140LQ9H930 580 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 TMEM45AQ9NWC5 275 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 SAMD4AQ9UPU9 718 aaKnown RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 FCF1Q9Y324 198 aaKnown RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 PCDHGA6Q9Y5G7 932 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 CLIC1O00299 241 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 CTDSP2O14595 271 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 CCNDBP1O95273 360 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 PTHP01270 115 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 NTRK1P04629 796 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 RHOCP08134 193 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 POU2F1P14859 743 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 RGS19P49795 217 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 CLCN4P51793 760 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 CDC20Q12834 499 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 ZNF648Q5T619 568 aaPredicted RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 ALG1LQ6GMV1 187 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 TCAIMQ8N3R3 496 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 SLAIN1Q8ND83 568 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 PXYLP1Q8TE99 480 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 MMP27Q9H306 513 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 ASB8Q9H765 288 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 TLR8Q9NR97 1041 aaKnown RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 DDX28Q9NUL7 540 aaKnown RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 RLIMQ9NVW2 624 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 PCDHB5Q9Y5E4 795 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 PCDHGA3Q9Y5H0 932 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 TDRD15B5MCY1 1934 aaKnown RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 K7ERQ8 282 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 WNT9AO14904 365 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 DYRK3O43781 588 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 F11P03951 625 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 KDELR2P33947 212 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 MAD2L1Q13257 205 aaPredicted RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 DDX39BQ13838 428 aaKnown RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 RNF219Q5W0B1 726 aaPredicted RBP13.18□□□□□ -0.3
PRKN-205ENST00000366897 IL17CQ9P0M4 197 aa13.18□□□□□ -0.3
PRKN-205ENST00000366897 FAM8A1Q9UBU6 413 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms