RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TEX44Q53QW1 395 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 ACER2Q5QJU3 275 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 H3F3CQ6NXT2 135 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 FIGLAQ6QHK4 219 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 TMEM205Q6UW68 189 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 LANCL3Q6ZV70 420 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 GALNTL5Q7Z4T8 443 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 CDC20BQ86Y33 519 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 LIX1LQ8IVB5 337 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 DEPDC4Q8N2C3 294 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 GHDCQ8N2G8 530 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 TAB3Q8N5C8 712 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 CPSF7Q8N684 471 aaKnown RBP8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 OR13C4Q8NGS5 318 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 SEC16BQ96JE7 1060 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 TEKT5Q96M29 485 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 SELENOSQ9BQE4 189 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 HSD3B7Q9H2F3 369 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 CLEC4MQ9H2X3 399 aaPredicted RBP8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 KCNJ16Q9NPI9 418 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 RASSF1Q9NS23 344 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 LIMA1Q9UHB6 759 aaKnown RBP8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 FAM153AQ9UHL3 310 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 ANAPC7Q9UJX3 599 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 ASF1AQ9Y294 204 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 PKP3Q9Y446 797 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 GTF3C1Q12789 2109 aa8.03□□□□□ -1.12
HMGB1P39-201ENST00000366304 A0A1B0GTH9 108 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 PRRG2O14669 202 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 EPOP01588 193 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 CYP1A2P05177 515 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 UQCRHP07919 91 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 MYBL1P10243 752 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 FBLP22087 321 aaKnown RBP8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 PSMB5P28074 263 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 RFC3P40938 356 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 DGKQP52824 942 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 NUP107P57740 925 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 OCA2Q04671 838 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 PMPCAQ10713 525 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 RPA4Q13156 261 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 PDK2Q15119 407 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 DBN1Q16643 649 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 YOD1Q5VVQ6 348 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 SLC9A4Q6AI14 798 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 CCDC70Q6NSX1 233 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 PPP1R2P3Q6NXS1 205 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 PAMR1Q6UXH9 720 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 CRLF3Q8IUI8 442 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZC3H7AQ8IWR0 971 aaKnown RBP8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 PIANPQ8IYJ0 282 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 TBC1D21Q8IYX1 336 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 ARHGEF39Q8N4T4 335 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 LRRN4CLQ8ND94 238 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 IPMKQ8NFU5 416 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 OR5K2Q8NHB8 316 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 FAM57AQ8TBR7 257 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 ENOX1Q8TC92 643 aaKnown RBP8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 ASB5Q8WWX0 329 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZNF837Q96EG3 531 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 DCUN1D1Q96GG9 259 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 VPS50Q96JG6 964 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 MRPL47Q9HD33 250 aaKnown RBP8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 RIC8BQ9NVN3 520 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 IL1RAPL1Q9NZN1 696 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 SAE1Q9UBE0 346 aaPredicted RBP8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 TRPC4Q9UBN4 977 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 IP6K2Q9UHH9 426 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 GNPTGQ9UJJ9 305 aa8.02□□□□□ -1.13
HMGB1P39-201ENST00000366304 ANK3Q12955 4377 aaKnown RBP8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 SLC5A10A0PJK1 596 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 AP2A1O95782 977 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 SP1P08047 785 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 KDELR1P24390 212 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 EEF1DP29692 281 aaKnown RBP8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 PTGS2P35354 604 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZNF140P52738 457 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 TAF1AQ15573 450 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 PRTGQ2VWP7 1150 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 DEFB113Q30KQ7 82 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 TCTE1Q5JU00 501 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 CHSY3Q70JA7 882 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 SERPINA9Q86WD7 417 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 VRK3Q8IV63 474 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 TTC29Q8NA56 475 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 RMND5BQ96G75 393 aaPredicted RBP8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 COPS8Q99627 209 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 APOL2Q9BQE5 337 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 FICDQ9BVA6 458 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZDHHC3Q9NYG2 299 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 CRIM1Q9NZV1 1036 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 HACD3Q9P035 362 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZC3H7BQ9UGR2 993 aaKnown RBP8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 CRLS1Q9UJA2 301 aa8.01□□□□□ -1.13
HMGB1P39-201ENST00000366304 TRBV5-4A0A0C4DH59 114 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 A0A0J9YVX5 310 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 A0A0U1RQJ8 604 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 FAM181BA6NEQ2 426 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 INAFM1C9JVW0 142 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms