RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ZNF284Q2VY69 593 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 FAM182AQ5T1J6 154 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 KIAA1161Q6NSJ0 714 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 CLEC9AQ6UXN8 241 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 LEKR1Q6ZMV7 388 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 PARS2Q7L3T8 475 aaKnown RBP7.71□□□□□ -1.18
YBX3-204ENST00000366290 PRPF39Q86UA1 669 aaKnown RBP7.71□□□□□ -1.18
YBX3-204ENST00000366290 SLC13A5Q86YT5 568 aaPredicted RBP7.71□□□□□ -1.18
YBX3-204ENST00000366290 LRRC49Q8IUZ0 686 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 CCDC50Q8IVM0 306 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 ASB12Q8WXK4 309 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 SKA1Q96BD8 255 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 HAUS1Q96CS2 278 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 EID2BQ96D98 161 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 HDAC11Q96DB2 347 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 SERAC1Q96JX3 654 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 PBKQ96KB5 322 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 ZNF599Q96NL3 588 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 TSGA13Q96PP4 275 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 ZNF747Q9BV97 191 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 TMEM120AQ9BXJ8 343 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 IL21RQ9HBE5 538 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 DYRK4Q9NR20 520 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 LUZP4Q9P127 313 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 LHX3Q9UBR4 397 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 IPO11Q9UI26 975 aaKnown RBP7.71□□□□□ -1.18
YBX3-204ENST00000366290 R3HDM2Q9Y2K5 976 aaKnown RBP7.71□□□□□ -1.18
YBX3-204ENST00000366290 PCDHGB3Q9Y5G1 929 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 FADS3Q9Y5Q0 445 aa7.71□□□□□ -1.18
YBX3-204ENST00000366290 ANKRD11Q6UB99 2663 aaPredicted RBP7.71□□□□□ -1.18
YBX3-204ENST00000366290 A0A1B0GTQ1 180 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 SRRM3A6NNA2 597 aaPredicted RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 APOC4-APOC2K7ER74 178 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 TLR4O00206 839 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 TAF4O00268 1085 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 YKT6O15498 198 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 ZSCAN9O15535 394 aaPredicted RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 FLRT2O43155 660 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 MAGEC1O60732 1142 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 USP1O94782 785 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 IGSF6O95976 241 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 APOC2P02655 101 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 HKR1P10072 659 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 ZFXP17010 805 aaPredicted RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 RXRGP48443 463 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 NR2C2P49116 596 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 RHOAP61586 193 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 RPS21P63220 83 aaKnown RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 RAD51Q06609 339 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 IL10RBQ08334 325 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 PPIDQ08752 370 aaKnown RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 TFDP2Q14188 446 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 SHBQ15464 509 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 TMEM95Q3KNT9 176 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 POM121L1PQ3SYA9 428 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 SLC45A4Q5BKX6 768 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 PAPD7Q5XG87 772 aaKnown RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 IGFL4Q6B9Z1 124 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 LIN54Q6MZP7 749 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 GDPD4Q6W3E5 623 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 B4GALNT4Q76KP1 1039 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 ABI3BPQ7Z7G0 1075 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 NAXDQ8IW45 347 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 RASGEF1CQ8N431 466 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 FSTL5Q8N475 847 aaPredicted RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 METTL25Q8N6Q8 603 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 C11orf44Q8N8P7 122 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 DEFB124Q8NES8 71 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 ACTL9Q8TC94 416 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 XAGE5Q8WWM1 108 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 RFKQ969G6 155 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 TRIM44Q96DX7 344 aaPredicted RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 MS4A14Q96JA4 679 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 NSMCE3Q96MG7 304 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 ZNF641Q96N77 438 aaPredicted RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 LENG8Q96PV6 779 aaPredicted RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 PSKH2Q96QS6 385 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 LGMNQ99538 433 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 FAM118BQ9BPY3 351 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 SCNM1Q9BWG6 230 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 SORBS1Q9BX66 1292 aaKnown RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 MAK16Q9BXY0 300 aaKnown RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 TM6SF2Q9BZW4 377 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 ZDHHC6Q9H6R6 413 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 EPS8L2Q9H6S3 715 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 SYBUQ9NX95 663 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 SMARCAL1Q9NZC9 954 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 UBA2Q9UBT2 640 aaPredicted RBP7.7□□□□□ -1.18
YBX3-204ENST00000366290 SNX12Q9UMY4 172 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 SH2B3Q9UQQ2 575 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 HEY1Q9Y5J3 304 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 HS3ST3A1Q9Y663 406 aa7.7□□□□□ -1.18
YBX3-204ENST00000366290 APC2O95996 2303 aa7.69□□□□□ -1.18
YBX3-204ENST00000366290 TDRD6O60522 2096 aaKnown RBP7.69□□□□□ -1.18
YBX3-204ENST00000366290 NPIPB8E9PQR5 432 aa7.69□□□□□ -1.18
YBX3-204ENST00000366290 SH3BP5O60239 455 aa7.69□□□□□ -1.18
YBX3-204ENST00000366290 TJP3O95049 919 aa7.69□□□□□ -1.18
YBX3-204ENST00000366290 NXPH3O95157 252 aa7.69□□□□□ -1.18
YBX3-204ENST00000366290 TRIM16O95361 564 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms