RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SGCBQ16585 318 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 CTXN3Q4LDR2 81 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 C5orf47Q569G3 176 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 SPIN3Q5JUX0 258 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 SLC35D3Q5M8T2 416 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 NAA35Q5VZE5 725 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 TMEM81Q6P7N7 255 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 INO80CQ6PI98 192 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 C2orf66Q6UXQ4 117 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 TPRG1Q6ZUI0 275 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 FCRLAQ7L513 359 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 RRAGAQ7L523 313 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 CPEB2Q7Z5Q1 589 aaKnown RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 LDB1Q86U70 411 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 CCDC13Q8IYE1 715 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 RASGEF1CQ8N431 466 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 CARNMT1Q8N4J0 409 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 OR6Y1Q8NGX8 325 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 SCAMP5Q8TAC9 235 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 CCDC107Q8WV48 283 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 SMARCD2Q92925 531 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 KIAA1191Q96A73 305 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 KIF1BPQ96EK5 621 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 ABHD6Q9BV23 337 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 ULBP2Q9BZM5 246 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 VN1R1Q9GZP7 353 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 CDH19Q9H159 772 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZBP1Q9H171 429 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 MROH8Q9H579 483 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 STN1Q9H668 368 aaKnown RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 ARFGAP3Q9NP61 516 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 HOMER2Q9NSB8 354 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 FAM207AQ9NSI2 230 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 C20orf141Q9NUB4 165 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 NPAP1Q9NZP6 1156 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 COPG2Q9UBF2 871 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZNF230Q9UIE0 474 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 HACL1Q9UJ83 578 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 FBXW11Q9UKB1 542 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 A4GNTQ9UNA3 340 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 CLCA3PQ9Y6N3 262 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 SCINQ9Y6U3 715 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 MAU2Q9Y6X3 613 aa-0.21□□□□□ -2.44
RNU6-54P-201ENST00000365563 MUC12Q9UKN1 5478 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 IGKV1D-43A0A0B4J1Z2 117 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 GOLGA6L10A0A0M3HER8 536 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 A0A1B0GW55 424 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 RRN3P2A6NIE6 340 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 AQP12BA6NM10 295 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 CCT8L1PA6NM43 557 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 C2orf81A6NN90 581 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZNF487B1APH4 448 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 B4DXG7 233 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 F8VVB4 439 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 F8VWA3 439 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 TMEM189-UBE2V1I3L0A0 370 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 J3QR06 171 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 J3QRE1 110 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 PEX12O00623 359 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 KLK10O43240 276 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 GPAA1O43292 621 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 N4BP1O75113 896 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 CAND2O75155 1236 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 TACC1O75410 805 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 JRKO75564 520 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 LETM1O95202 739 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 KCNK5O95279 499 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 HSPB1P04792 205 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 DUX4L2P0CJ85 424 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 DUX4L3P0CJ86 424 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 DUX4L5P0CJ88 424 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 DUX4L6P0CJ89 424 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 DUX4L7P0CJ90 424 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 DARSP14868 501 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 PGAM2P15259 253 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 AADACP22760 399 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 ELAVL4P26378 380 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 MAGEA9P43362 315 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 GNAQP50148 359 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 ZNF75DP51815 510 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 EFNA3P52797 238 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 EIF5P55010 431 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 CXCL6P80162 114 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 MRPS34P82930 218 aaKnown RBP-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 DMPKQ09013 629 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 UBE2V1Q13404 147 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 PDE7AQ13946 482 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 SPARCL1Q14515 664 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 HERC3Q15034 1050 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 PTPN14Q15678 1187 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 KYAT1Q16773 422 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 MEP1AQ16819 746 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 TMEM266Q2M3C6 531 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 CCDC14Q49A88 953 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 COBLL1Q53SF7 1204 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 MDH1BQ5I0G3 518 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 FAM209BQ5JX69 171 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 MUC21Q5SSG8 566 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 HYIQ5T013 277 aa-0.22□□□□□ -2.44
RNU6-54P-201ENST00000365563 SAXO2Q658L1 398 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms