RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 SLC38A4Q969I6 547 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 NSUN5Q96P11 429 aaKnown RBP13.47□□□□□ -0.25
CTR9-201ENST00000361367 GIMAP2Q9UG22 337 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 RIMKLBQ9ULI2 386 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 ECM29Q5VYK3 1845 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 GMFGO60234 142 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 KRT8P05787 483 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 AGXTP21549 392 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 ITGB7P26010 798 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 GJA4P35212 333 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 YAP1P46937 504 aaKnown RBP13.47□□□□□ -0.25
CTR9-201ENST00000361367 SLC6A11P48066 632 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 SOX9P48436 509 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 CHN2P52757 468 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 CRISP3P54108 245 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 FOXJ1Q92949 421 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 TSACCQ96A04 125 aaPredicted RBP13.47□□□□□ -0.25
CTR9-201ENST00000361367 C5orf34Q96MH7 638 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 IL17FQ96PD4 163 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 CGREF1Q99674 301 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 REXO4Q9GZR2 422 aaKnown RBP13.47□□□□□ -0.25
CTR9-201ENST00000361367 MVB12BQ9H7P6 319 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 KLHL1Q9NR64 748 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 KRT33AO76009 404 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 KLKB1P03952 638 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 CD72P21854 359 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 IGFBP6P24592 240 aaPredicted RBP13.47□□□□□ -0.25
CTR9-201ENST00000361367 IL12BP29460 328 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 UFM1P61960 85 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 DGKKQ5KSL6 1271 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 RTL4Q6ZR62 310 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 CBARPQ8N350 705 aaPredicted RBP13.47□□□□□ -0.25
CTR9-201ENST00000361367 PIK3C3Q8NEB9 887 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 FBRSL1Q9HCM7 1045 aaKnown RBP13.47□□□□□ -0.25
CTR9-201ENST00000361367 SPATA7Q9P0W8 599 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 PHF11Q9UIL8 331 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 UTS2RQ9UKP6 389 aa13.47□□□□□ -0.25
CTR9-201ENST00000361367 CXCL10P02778 98 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 RGRP47804 291 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 ARF5P84085 180 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 EMX2Q04743 252 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 MLIPQ5VWP3 458 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 NAIF1Q69YI7 327 aaPredicted RBP13.46□□□□□ -0.25
CTR9-201ENST00000361367 PNPLA1Q8N8W4 532 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 LRRC58Q96CX6 371 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 TRIB3Q96RU7 358 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 SLC35A5Q9BS91 424 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 PPIEQ9UNP9 301 aaKnown RBP13.46□□□□□ -0.25
CTR9-201ENST00000361367 CCL26Q9Y258 94 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 COL4A1P02462 1669 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 C2orf74A8MZ97 194 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 ADAMDEC1O15204 470 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 JUNP05412 331 aaKnown RBP13.46□□□□□ -0.25
CTR9-201ENST00000361367 KLHL12Q53G59 568 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.46□□□□□ -0.25
CTR9-201ENST00000361367 TICAM1Q8IUC6 712 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 PHTF2Q8N3S3 785 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 OR5AK3PQ8NH89 298 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 LINC01599Q8WXQ3 324 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 PMEPA1Q969W9 287 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 ZNF689Q96CS4 500 aaPredicted RBP13.46□□□□□ -0.25
CTR9-201ENST00000361367 MRPL38Q96DV4 380 aaKnown RBP13.46□□□□□ -0.25
CTR9-201ENST00000361367 TRAPPC9Q96Q05 1148 aa13.46□□□□□ -0.25
CTR9-201ENST00000361367 CPEB1Q9BZB8 566 aaKnown RBP13.46□□□□□ -0.25
CTR9-201ENST00000361367 PNO1Q9NRX1 252 aaKnown RBP13.46□□□□□ -0.25
CTR9-201ENST00000361367 WASH3PC4AMC7 463 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 PGRP06401 933 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 C1GALT1C1LP0DN25 315 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 TCF3P15923 654 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 GMPRP36959 345 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 CDKN1CP49918 316 aaPredicted RBP13.46□□□□□ -0.26
CTR9-201ENST00000361367 GALK1P51570 392 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 GRIN2CQ14957 1233 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 IFI44LQ53G44 452 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 DCST1Q5T197 706 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 TANGO2Q6ICL3 276 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 GJD3Q8N144 294 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 C17orf62Q9BQA9 187 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 YIPF4Q9BSR8 244 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 CWH43Q9H720 699 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 DNAAF2Q9NVR5 837 aaKnown RBP13.46□□□□□ -0.26
CTR9-201ENST00000361367 MKS1Q9NXB0 559 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 SERTAD3Q9UJW9 196 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 A8MUA0 341 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 hCG_2039718K7EN88 272 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 HNRNPA2B1P22626 353 aaKnown RBP13.46□□□□□ -0.26
CTR9-201ENST00000361367 TALDO1P37837 337 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 CTSKP43235 329 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 NFE2L1Q14494 772 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 INAQ16352 499 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 TRIM71Q2Q1W2 868 aaKnown RBP13.46□□□□□ -0.26
CTR9-201ENST00000361367 SPANXN4Q5MJ08 99 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.46□□□□□ -0.26
CTR9-201ENST00000361367 MYLIPQ8WY64 445 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 NT5C3BQ969T7 300 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 PRDM8Q9NQV8 689 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 HEBP1Q9NRV9 189 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 DLGAP4Q9Y2H0 992 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 PCDHGA2Q9Y5H1 932 aa13.46□□□□□ -0.26
CTR9-201ENST00000361367 FADS3Q9Y5Q0 445 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms