RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 PAOXQ6QHF9 649 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 C17orf64Q86WR6 236 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ZFAND4Q86XD8 727 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 C2orf73Q8N5S3 287 aaPredicted RBP20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 LINC01555Q8NAE3 123 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SH3KBP1Q96B97 665 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TCEAL2Q9H3H9 227 aaPredicted RBP20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PELI2Q9HAT8 420 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SPATA6Q9NWH7 488 aaPredicted RBP20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 C1orf109Q9NX04 203 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ASIC5Q9NY37 505 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 NOP53Q9NZM5 478 aaKnown RBP20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ZNF624Q9P2J8 865 aaPredicted RBP20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ICKQ9UPZ9 632 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 HCN4Q9Y3Q4 1203 aa20.25■□□□□ 0.83
MAP1LC3A-201ENST00000360668 WDFY4Q6ZS81 3184 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SLC2A4P14672 509 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 BCKDHBP21953 392 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 DMWDQ09019 674 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TCEA2Q15560 299 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 HIST2H2ACQ16777 129 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 HIST2H2AA3Q6FI13 130 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 GK5Q6ZS86 529 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 FBXO27Q8NI29 283 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CXorf40BQ96DE9 158 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CMTM7Q96FZ5 175 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 C1orf50Q9BV19 199 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 DUSP15Q9H1R2 295 aaPredicted RBP20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 BRF2Q9HAW0 419 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TM9SF3Q9HD45 589 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 GEMIN8Q9NWZ8 242 aaKnown RBP20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CCDC167Q9P0B6 97 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TAAR2Q9P1P5 351 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TAC3Q9UHF0 121 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CEP192Q8TEP8 1941 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PCM1Q15154 2024 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 FANCMQ8IYD8 2048 aa20.24■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TLR4O00206 839 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SNRPB2P08579 225 aaKnown RBP20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CTSEP14091 401 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 STX5Q13190 355 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CUL3Q13618 768 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SLBPQ14493 270 aaKnown RBP eCLIP20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 RFTN2Q52LD8 501 aaPredicted RBP20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 IYDQ6PHW0 289 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 LAS2Q8IYD9 372 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 OR7G3Q8NG95 312 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 C1orf216Q8TAB5 229 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 DNASE2BQ8WZ79 361 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 UBE2E3Q969T4 207 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 NRTNQ99748 197 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SLC25A23Q9BV35 468 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 XKR8Q9H6D3 395 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PRMT8Q9NR22 394 aaPredicted RBP20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ZIM2Q9NZV7 527 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 EIF3LQ9Y262 564 aaKnown RBP20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TSC22D4Q9Y3Q8 395 aa20.23■□□□□ 0.83
MAP1LC3A-201ENST00000360668 OR5K4A6NMS3 321 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SEC22BO75396 215 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CDH1P12830 882 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 MAOBP27338 520 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SHMT2P34897 504 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SLC19A1P41440 591 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 RPL38P63173 70 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ZNF542PQ5EBM4 170 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 IL23RQ5VWK5 629 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 FUNDC1Q8IVP5 155 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ABHD11Q8NFV4 315 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 OR9I1Q8NGQ6 314 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ZFPM2Q8WW38 1151 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 MIR1-1HGQ9H1L0 117 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 NDE1Q9NXR1 346 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 APOBEC3BQ9UH17 382 aaKnown RBP20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 BAIAP2L1Q9UHR4 511 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TMED5Q9Y3A6 229 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PCDHB11Q9Y5F2 797 aa20.22■□□□□ 0.83
MAP1LC3A-201ENST00000360668 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PRAMEF33A0A0G2JMD5 474 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PIPSLA2A3N6 862 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 CSF2P04141 144 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ACPPP15309 386 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 PCSK2P16519 638 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 JUNDP17535 347 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 KIAA0040Q15053 153 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TAF8Q7Z7C8 310 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 FAM129CQ86XR2 697 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 SCUBE1Q8IWY4 988 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TMEFF1Q8IYR6 380 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 KRT78Q8N1N4 520 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 TSPEARQ8WU66 669 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 RCN3Q96D15 328 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 METTL2AQ96IZ6 378 aaKnown RBP20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 ACAT2Q9BWD1 397 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 EFCAB1Q9HAE3 211 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 OR6C2Q9NZP2 312 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 POLR3HQ9Y535 204 aaPredicted RBP20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 KIR2DS5A0A0G2JLQ3 304 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 A0A0G2JNG1 304 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 KIR2DS3K7RE56 304 aa20.21■□□□□ 0.83
MAP1LC3A-201ENST00000360668 FOXE1O00358 373 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms