RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ALG10BQ5I7T1 473 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 CRB2Q5IJ48 1285 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 PRAMEF14Q5SWL7 426 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 PRAMEF13Q5VWM6 474 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 ZNF627Q7L945 461 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 PHB2Q99623 299 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 LRRC3Q9BY71 257 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 EIF3KQ9UBQ5 218 aaKnown RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 STXBP5LQ9Y2K9 1186 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 NDUFS4O43181 175 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 DSG2Q14126 1118 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 PON3Q15166 354 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 NPTX1Q15818 432 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 CYP2U1Q7Z449 544 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 DNAAF1Q8NEP3 725 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 SH3RF2Q8TEC5 729 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 SLC29A3Q9BZD2 475 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 EVLQ9UI08 416 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 S100A7P31151 101 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 OR4K17Q8NGC6 315 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 EURLQ9NYK6 297 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 ZNF670-ZNF695F2Z2N8 137 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 ALPIP09923 528 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 RYKP34925 604 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 GRIA1P42261 906 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 HNRNPDQ14103 355 aaKnown RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 TAC4Q86UU9 113 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 MRPL41Q8IXM3 137 aaKnown RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 C2orf73Q8N5S3 287 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 POLR2J2Q9GZM3 115 aaKnown RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 TLR9Q9NR96 1032 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 FBXL12Q9NXK8 326 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 SMCHD1A6NHR9 2005 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 DHPSP49366 369 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 DPYSL2Q16555 572 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 SYT16Q17RD7 645 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 FAM86B1Q8N7N1 296 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 PCED1BQ96HM7 432 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 DUSP26Q9BV47 211 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 B3GNT5Q9BYG0 378 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 NDRG2Q9UN36 371 aaKnown RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 SNX10Q9Y5X0 201 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 AHSA1O95433 338 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 MAD2L1BPQ15013 274 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 SMPDL3BQ92485 455 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 MAGEE1Q9HCI5 957 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 FER1L6Q2WGJ9 1857 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 FFAR2O15552 330 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 PSKH1P11801 424 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 UBXN2BQ14CS0 331 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 SF3B4Q15427 424 aaKnown RBP eCLIP9.45□□□□□ -0.95e-6■■■■□ 20.8
CUX1-203ENST00000360264 TNFAIP8L2Q6P589 184 aaPredicted RBP9.45□□□□□ -0.9
CUX1-203ENST00000360264 C7orf61Q8IZ16 206 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 YIPF7Q8N8F6 280 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 MYNNQ9NPC7 610 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 ANKRD26Q9UPS8 1709 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 A0A1B0GVI7 797 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 CYP11A1P05108 521 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 C6orf52Q5T4I8 152 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 PHF19Q5T6S3 580 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 ZNF676Q8N7Q3 588 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 ARHGAP9Q9BRR9 750 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 POFUT2Q9Y2G5 429 aa9.45□□□□□ -0.9
CUX1-203ENST00000360264 ANXA3P12429 323 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 SAMD11Q96NU1 681 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 IL25Q9H293 177 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 ZDHHC3Q9NYG2 299 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ZNF224Q9NZL3 707 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 FER1L5A0AVI2 2057 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 KLHL33A6NCF5 533 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 KDM4BO94953 1096 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 APOL3O95236 402 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 CSTBP04080 98 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 ABCG1P45844 678 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 IDH3AP50213 366 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ARPC4P59998 168 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 DSTNP60981 165 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 RPL26P61254 145 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 POU4F2Q12837 409 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 TIGD5Q53EQ6 642 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ADGRF1Q5T601 910 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 C1orf127Q8N9H9 656 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 SIDT2Q8NBJ9 832 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 SLC7A6OSQ96CW6 309 aaPredicted RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 ABCG8Q9H221 673 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 A0A1W2PRB8 838 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 HTR3EA5X5Y0 456 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ZNF878C9JN71 531 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ERI3O43414 337 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 DUSP3P51452 185 aaPredicted RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 EGFLAMQ63HQ2 1017 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 NANOGNBQ7Z5D8 188 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 CMC1Q7Z7K0 106 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 BTBD1Q9H0C5 482 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 SPATA31D1Q6ZQQ2 1576 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 OAS1P00973 400 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 LACTB2Q53H82 288 aaPredicted RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 ARL13AQ5H913 290 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms