RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 AGR2O95994 175 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 ZNF865P0CJ78 1059 aaPredicted RBP11.92□□□□□ -0.5
DNMT1-202ENST00000359526 GIMD1P0DJR0 217 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 FPR1P21462 350 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 ITPKBP27987 946 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 IGFALSP35858 605 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 CHRNA4P43681 627 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 OGDHQ02218 1023 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 SWI5Q1ZZU3 235 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 SIRPB2Q5JXA9 342 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 COLEC12Q5KU26 742 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 ZNF773Q6PK81 442 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 ARNTL2Q8WYA1 636 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 RNF31Q96EP0 1072 aa11.92□□□□□ -0.5
DNMT1-202ENST00000359526 LIN28AQ9H9Z2 209 aaKnown RBP11.92□□□□□ -0.5
DNMT1-202ENST00000359526 LOC100130705A0A1B0GUX0 176 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 PRAMEF12O95522 483 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 ALPPP05187 535 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 HSPB3Q12988 150 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TARDBPQ13148 414 aaKnown RBP eCLIP11.91□□□□□ -0.52e-7■■■■□ 23.9
DNMT1-202ENST00000359526 FAM91A1Q658Y4 838 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 ZNF776Q68DI1 518 aaPredicted RBP11.91□□□□□ -0.5
DNMT1-202ENST00000359526 CCDC28AQ8IWP9 274 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 HERVK_113Q902F9 699 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 NR4A3Q92570 626 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 SNTG1Q9NSN8 517 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TBC1D3DA0A087WVF3 549 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TBC1D3IA0A087WXS9 549 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TBC1D3EA0A087X179 549 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TBC1D3KA0A087X1G2 549 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TBC1D3FA6NER0 549 aaPredicted RBP11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TBC1D3LB9A6J9 549 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 INPPL1O15357 1258 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TBC1D3HP0C7X1 549 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 ENTPD1P49961 510 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 ABHD18Q0P651 414 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 RBM20Q5T481 1227 aaKnown RBP11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TBC1D3GQ6DHY5 549 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TBC1D3CQ6IPX1 549 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 FRRS1Q6ZNA5 592 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 CIR1Q86X95 450 aaPredicted RBP11.91□□□□□ -0.5
DNMT1-202ENST00000359526 GPALPP1Q8IXQ4 340 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TBC1D3Q8IZP1 549 aaPredicted RBP11.91□□□□□ -0.5
DNMT1-202ENST00000359526 MKLN1Q9UL63 735 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 CLEC4AQ9UMR7 237 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 PRKAB1Q9Y478 270 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 OR14I1A6ND48 311 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 FBP2O00757 339 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TIMP1P01033 207 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 ACSL1P33121 698 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 YAP1P46937 504 aaKnown RBP11.91□□□□□ -0.5
DNMT1-202ENST00000359526 EMX2Q04743 252 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 SLC10A7Q0GE19 358 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 SEMA3AQ14563 771 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TOMM20Q15388 145 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 SLC39A4Q6P5W5 647 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 ZNF613Q6PF04 617 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 GPR135Q8IZ08 494 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 NAT16Q8N8M0 369 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TSTD1Q8NFU3 115 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 OR13C4Q8NGS5 318 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 BPIFB1Q8TDL5 484 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TNFAIP8L1Q8WVP5 186 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 PYURFQ96I23 114 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 IGSF21Q96ID5 467 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 ZNF641Q96N77 438 aaPredicted RBP11.91□□□□□ -0.5
DNMT1-202ENST00000359526 HBEGFQ99075 208 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 TUBA1CQ9BQE3 449 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 DCSTAMPQ9H295 470 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 H0YJX3 145 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 KCNJ13O60928 360 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 ABCB7O75027 752 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 VIPP01282 170 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 CD72P21854 359 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 XKP51811 444 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 PCDH1Q08174 1060 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 EIF4HQ15056 248 aaKnown RBP11.91□□□□□ -0.5
DNMT1-202ENST00000359526 ZNF423Q2M1K9 1284 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 FNDC8Q8TC99 324 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 KIAA1191Q96A73 305 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 C12orf43Q96C57 262 aaKnown RBP11.91□□□□□ -0.5
DNMT1-202ENST00000359526 CCM2Q9BSQ5 444 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 CCDC106Q9BWC9 280 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 EMC3Q9P0I2 261 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 SLC17A6Q9P2U8 582 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 SUSD2Q9UGT4 822 aa11.91□□□□□ -0.5
DNMT1-202ENST00000359526 LCHNA4D1U4 455 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 IQCF5A8MTL0 148 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 H0YAE9 185 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 POU2F1P14859 743 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 DNASE1L1P49184 302 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 DUSP3P51452 185 aaPredicted RBP11.9□□□□□ -0.5
DNMT1-202ENST00000359526 DSC3Q14574 896 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 CYS1Q717R9 158 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 LGI4Q8N135 537 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 PHTF2Q8N3S3 785 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 CHCHD4Q8N4Q1 142 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 C2CD4AQ8NCU7 369 aaPredicted RBP11.9□□□□□ -0.5
DNMT1-202ENST00000359526 BORCS6Q96GS4 357 aa11.9□□□□□ -0.5
DNMT1-202ENST00000359526 TRNT1Q96Q11 434 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms