RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 LMLNQ96KR4 655 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 ITPAQ9BY32 194 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 IL1RAPQ9NPH3 570 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 NLE1Q9NVX2 485 aaPredicted RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 ZCWPW2A0A1B0GU75 182 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 MCIDASD6RGH6 385 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 KDELR3O43731 214 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 PTPN2P17706 415 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 VBP1P61758 197 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 AKIRIN2Q53H80 203 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 FAM91A1Q658Y4 838 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 TPGS2Q68CL5 300 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 LRRC66Q68CR7 880 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 AGTRAPQ6RW13 159 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 GEMIN6Q8WXD5 167 aaKnown RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 ZNF514Q96K75 400 aaPredicted RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 PSKH2Q96QS6 385 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 KCNN2Q9H2S1 579 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 OR51B5Q9H339 312 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 POFUT2Q9Y2G5 429 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 DNAJC15Q9Y5T4 150 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 IGKV6D-21A0A0A0MT36 114 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 FGF19O95750 216 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 ECDO95905 644 aaPredicted RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 ATP1B2P14415 290 aaPredicted RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 RPS3AP61247 264 aaKnown RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 ZNF155Q12901 538 aaPredicted RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 GRB14Q14449 540 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 TOMM20Q15388 145 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 RPTNQ6XPR3 784 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 FRRS1Q6ZNA5 592 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 GET4Q7L5D6 327 aaPredicted RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 SYVN1Q86TM6 617 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 IQCHQ86VS3 1027 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 THOC6Q86W42 341 aaKnown RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.36□□□□□ -0.27
VCP-201ENST00000358901 CD244Q9BZW8 370 aa13.36□□□□□ -0.27
VCP-201ENST00000358901 ORC5O43913 435 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 SLC15A1P46059 708 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 STARP49675 285 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 CDKN2DP55273 166 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 PIGFQ07326 219 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 DNASE1L3Q13609 305 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 SEMA3AQ14563 771 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 RAB39AQ14964 217 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 ZNF404Q494X3 552 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 TNFAIP8L3Q5GJ75 292 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 OGFRL1Q5TC84 451 aaPredicted RBP13.35□□□□□ -0.27
VCP-201ENST00000358901 ANKRD26P1Q6NSI1 321 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 KBTBD6Q86V97 674 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 SLC22A16Q86VW1 577 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 ZNF280BQ86YH2 543 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 KDM1BQ8NB78 822 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 OR4C6Q8NH72 309 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 RHEBL1Q8TAI7 183 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 KBTBD7Q8WVZ9 684 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 IGSF8Q969P0 613 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 TBX5Q99593 518 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 TRMT61BQ9BVS5 477 aaKnown RBP13.35□□□□□ -0.27
VCP-201ENST00000358901 TAS2R7Q9NYW3 318 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 TMED5Q9Y3A6 229 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 ST14Q9Y5Y6 855 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 CAPN15O75808 1086 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 HOXA11P31270 313 aaPredicted RBP13.35□□□□□ -0.27
VCP-201ENST00000358901 MS4A2Q01362 244 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 ZNF423Q2M1K9 1284 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 OR4K1Q8NGD4 311 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 C1orf74Q96LT6 269 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 ZNF354BQ96LW1 612 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 FAM25EA8MYX2 175 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 TLR4O00206 839 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 BCHEP06276 602 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 H1F0P07305 194 aaKnown RBP13.35□□□□□ -0.27
VCP-201ENST00000358901 SLC11A1P49279 550 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 NCBP2P52298 156 aaKnown RBP eCLIP13.35□□□□□ -0.27
VCP-201ENST00000358901 SCAPQ12770 1279 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 TSTQ16762 297 aaKnown RBP13.35□□□□□ -0.27
VCP-201ENST00000358901 SPIN4Q56A73 249 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 PIGGQ5H8A4 983 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 C6orf141Q5SZD1 244 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 GPRC6AQ5T6X5 926 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 KIAA1614Q5VZ46 1190 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 MBOAT1Q6ZNC8 495 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 ZNF420Q8TAQ5 688 aaPredicted RBP13.35□□□□□ -0.27
VCP-201ENST00000358901 KLHL6Q8WZ60 621 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 TRNT1Q96Q11 434 aaKnown RBP13.35□□□□□ -0.27
VCP-201ENST00000358901 IL12RB2Q99665 862 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 MEAF6Q9HAF1 191 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 POPDC3Q9HBV1 291 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 FAM120CQ9NX05 1096 aaKnown RBP13.35□□□□□ -0.27
VCP-201ENST00000358901 COLEC10Q9Y6Z7 277 aa13.35□□□□□ -0.27
VCP-201ENST00000358901 LRRC72A6NJI9 287 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 LDB2O43679 373 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 APODP05090 189 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 IQCF3P0C7M6 154 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 CHRM1P11229 460 aaPredicted RBP13.34□□□□□ -0.27
VCP-201ENST00000358901 TUBA3CQ13748 450 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 PRAMEF14Q5SWL7 426 aa13.34□□□□□ -0.27
VCP-201ENST00000358901 PRAMEF13Q5VWM6 474 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms