RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 BDKRB1P46663 353 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 FAM189BP81408 668 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 CBX2Q14781 532 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 PDZK1Q5T2W1 519 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 RNF111Q6ZNA4 994 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 COL26A1Q96A83 441 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 MAGEB10Q96LZ2 347 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 OR2AG1Q9H205 316 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 RAD18Q9NS91 495 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 PNMA8CA0A1B0GUJ8 204 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 PRR23D1E9PI22 279 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 IGLV3-25P01717 112 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 PRR23D2P0DMB1 279 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 NR2F1P10589 423 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 ITGA2P17301 1181 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 ATF4P18848 351 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 ACRV1P26436 265 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 DSC1Q08554 894 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 ABHD18Q0P651 414 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 GRIK2Q13002 908 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 NPTX1Q15818 432 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 RTN4RL1Q86UN2 441 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 PHYKPLQ8IUZ5 450 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 UBE2E3Q969T4 207 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 SGIP1Q9BQI5 828 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 MOV10Q9HCE1 1003 aaKnown RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 SACM1LQ9NTJ5 587 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 MTRRQ9UBK8 725 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 FZD4Q9ULV1 537 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 NUP214P35658 2090 aaPredicted RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 SCAMP1O15126 338 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 PCDH7O60245 1069 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 NPPAP01160 153 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 KLKB1P03952 638 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 MMP2P08253 660 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 ZNF773Q6PK81 442 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 PGBD3Q8N328 593 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 PYURFQ96I23 114 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 SLC29A3Q9BZD2 475 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 IRF2BPLQ9H1B7 796 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 MTIF3Q9H2K0 278 aaKnown RBP11.92□□□□□ -0.5
COL20A1-201ENST00000358894 ZNF221Q9UK13 617 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 MAPRE3Q9UPY8 281 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 OARD1Q9Y530 152 aa11.92□□□□□ -0.5
COL20A1-201ENST00000358894 A0A0G2JN53 185 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 A0A1B0GTW7 788 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 PIPSLA2A3N6 862 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 EFCAB10A6NFE3 127 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 H0YJX3 145 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 GRIA2P42262 883 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 SGSHP51688 502 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 NUDT6P53370 316 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 NCF4Q15080 339 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TAB1Q15750 504 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL20A1-201ENST00000358894 DEPDC4Q8N2C3 294 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TEX26Q8N6G2 289 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 CNIH3Q8TBE1 160 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 PROKR1Q8TCW9 393 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 NUDT8Q8WV74 236 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 XAGE5Q8WWM1 108 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TFAP2CQ92754 450 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 DHRS1Q96LJ7 313 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TUBB1Q9H4B7 451 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TPT1P8Q9HAU6 139 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 WNT6Q9Y6F9 365 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 ZNF99A8MXY4 864 aaPredicted RBP11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TARM1B6A8C7 271 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 MYL12BO14950 172 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 B4GALT3O60512 393 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 MTHFD2P13995 350 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 CD70P32970 193 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 PTGS2P35354 604 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 ARF5P84085 180 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 PMS2P3Q13401 168 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TYSND1Q2T9J0 566 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 GCNT6Q5T4J0 391 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 PTCHD4Q6ZW05 846 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 LRRC70Q7Z2Q7 622 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 C17orf64Q86WR6 236 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 SLC22A15Q8IZD6 547 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 C19orf18Q8NEA5 215 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 OR8J3Q8NGG0 315 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 SLC22A17Q8WUG5 538 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 EXOSC8Q96B26 276 aaKnown RBP11.91□□□□□ -0.5
COL20A1-201ENST00000358894 MYEOVQ96EZ4 313 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TEX37Q96LM6 180 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 AGPAT4Q9NRZ5 378 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 KLHL3Q9UH77 587 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TRIP12Q14669 1992 aaPredicted RBP11.91□□□□□ -0.5
COL20A1-201ENST00000358894 A8MU76 341 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TMEM189-UBE2V1I3L0A0 370 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 AP1S2P56377 157 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TXNL4AP83876 142 aaKnown RBP11.91□□□□□ -0.5
COL20A1-201ENST00000358894 SGCGQ13326 291 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 COQ5Q5HYK3 327 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 TUBA3EQ6PEY2 450 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 AGTRAPQ6RW13 159 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 HDDC2Q7Z4H3 204 aa11.91□□□□□ -0.5
COL20A1-201ENST00000358894 THOC6Q86W42 341 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms