RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 HMGN1P05114 100 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 MSS51Q4VC12 460 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 FBXO48Q5FWF7 155 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ADGRG2Q8IZP9 1017 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SYNPOQ8N3V7 929 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 CNIH3Q8TBE1 160 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 TSPEARQ8WU66 669 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 DPF3Q92784 378 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SNX27Q96L92 541 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 PGLYRP2Q96PD5 576 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 CDT1Q9H211 546 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 CLIC1O00299 241 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 GABRDO14764 452 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 OR1I1O60431 355 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 CREBL2O60519 120 aaPredicted RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ESR1P03372 595 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SLC25A25Q6KCM7 469 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 FBXL19Q6PCT2 694 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 NETO2Q8NC67 525 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 NEIL3Q8TAT5 605 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ZBED6CLQ96FA7 236 aaPredicted RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 GPR22Q99680 433 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 PPIL3Q9H2H8 161 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 LYARQ9NX58 379 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 DTLQ9NZJ0 730 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 GLYATL1P3A0A0U1RQE8 302 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 TCRBV7S3A2A0A539 114 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ARL5CA6NH57 179 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SLC1A7O00341 560 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 FNTBP49356 437 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 STXBP1P61764 594 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SLC13A2Q13183 592 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 CAPSQ13938 189 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 PTF1AQ7RTS3 328 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SSX6Q7RTT6 188 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 VSIG10LQ86VR7 867 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 FIBCD1Q8N539 461 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 TOP6BLQ8N6T0 577 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ZSCAN1Q8NBB4 408 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SLC43A3Q8NBI5 491 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 BRSK1Q8TDC3 778 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ADAMTS15Q8TE58 950 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 DNAJB3Q8WWF6 145 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 THRSPQ92748 146 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 NKD1Q969G9 470 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 KXD1Q9BQD3 176 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SCP2D1Q9UJQ7 156 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SEC16AO15027 2179 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ARL6IP5O75915 188 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 C8GP07360 202 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 CETPP11597 493 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 HK1P19367 917 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ACVR2AP27037 513 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 PTGER3P43115 390 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 MAP2K4P45985 399 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 C2orf80Q0P641 193 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 CRY2Q49AN0 593 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ABCA11PQ4W5N1 156 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 C16orf59Q7L2K0 433 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 UBQLNLQ8IYU4 475 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 NEDD4LQ96PU5 975 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 TIMM8BQ9Y5J9 83 aaPredicted RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 MATN3O15232 486 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 RNASEH2AO75792 299 aaKnown RBP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 DSC3Q14574 896 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 ZCCHC12Q6PEW1 402 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SNX29P2Q8IUI4 249 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 KIAA0319LQ8IZA0 1049 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.56□□□□□ -1.04
COL6A6-201ENST00000358511 OR2L2Q8NH16 312 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SETD6Q8TBK2 473 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 LHPPQ9H008 270 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 SCN2AQ99250 2005 aa8.56□□□□□ -1.04
COL6A6-201ENST00000358511 IRF6O14896 467 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 PAHP00439 452 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 SPIN4Q56A73 249 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 C9orf64Q5T6V5 341 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 TSTD2Q5T7W7 516 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF627Q7L945 461 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 OR8J3Q8NGG0 315 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 MED30Q96HR3 178 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 SLC35A5Q9BS91 424 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 CCDC86Q9H6F5 360 aaKnown RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 UBIAD1Q9Y5Z9 338 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 DLX3O60479 287 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 C22orf31O95567 290 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 IL1BP01584 269 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 H1F0P07305 194 aaKnown RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 MAPK3P27361 379 aaPredicted RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 CD300LFQ8TDQ1 290 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 FCAMRQ8WWV6 532 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 OSTF1Q92882 214 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 SCRN2Q96FV2 425 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 MIR1-1HGQ9H1L0 117 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 RGCCQ9H4X1 137 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 ZNF395Q9H8N7 513 aaPredicted RBP8.55□□□□□ -1.04
COL6A6-201ENST00000358511 MEAF6Q9HAF1 191 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 A0A1B0GVC2 190 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 A0A1B0GVI7 797 aa8.55□□□□□ -1.04
COL6A6-201ENST00000358511 PRORSD1PA6NEY8 169 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms