RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 FARS2O95363 451 aaKnown RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 CBX6O95503 412 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 LSM8O95777 96 aaKnown RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 CD79AP11912 226 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 MLLT10P55197 1068 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 LAPTM4BQ86VI4 370 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SNX29P2Q8IUI4 249 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 OR5AK3PQ8NH89 298 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 NSMAFQ92636 917 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 WDR12Q9GZL7 423 aaKnown RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 EIF5A2Q9GZV4 153 aaKnown RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 SPAG4Q9NPE6 437 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 ANKRD28O15084 1053 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SPARCP09486 303 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 GGT2P36268 569 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 ADH7P40394 386 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 HSPA7P48741 367 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 LAPTM5Q13571 262 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 EOGTQ5NDL2 527 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 TRIM74Q86UV6 250 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 TRIM73Q86UV7 250 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 C12orf40Q86WS4 652 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 CNEP1R1Q8N9A8 125 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 TUBG2Q9NRH3 451 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 FARSBQ9NSD9 589 aaKnown RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 MROH2AA6NES4 1674 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 UBOX5O94941 541 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 ATE1O95260 518 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 CH25HO95992 272 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 ADRB2P07550 413 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 CHRM1P11229 460 aaPredicted RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 RPS3P23396 243 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHD3-202ENST00000358181 F2RP25116 425 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 MALLQ13021 153 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 EIPR1Q53HC9 387 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SPDYCQ5MJ68 293 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 AHSA2Q719I0 299 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SFRP1Q8N474 314 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SLC44A3Q8N4M1 653 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 ERMAPQ96PL5 475 aaPredicted RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 CCDC28BQ9BUN5 200 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 PTGES2Q9H7Z7 377 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 LRTM1Q9HBL6 345 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 PCDH9Q9HC56 1237 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 B3GNT2Q9NY97 397 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SLC7A11Q9UPY5 501 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 CACNA1FO60840 1977 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 A0A1W2PQ45 241 aaPredicted RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 A0A1W2PQY0 241 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 ZNF850A8MQ14 1090 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 CHEK1O14757 476 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 PAGE1O75459 146 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 EOMESO95936 686 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 GSTT2P0CG29 244 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SLC2A5P22732 501 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 IGFBP5P24593 272 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 GABRA2P47869 451 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 PITPNAQ00169 270 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 AAK1Q2M2I8 961 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 ZNF311Q5JNZ3 666 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 GK5Q6ZS86 529 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 ADAMTSL2Q86TH1 951 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SPPL2CQ8IUH8 684 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHD3-202ENST00000358181 MFSD8Q8NHS3 518 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 AZIN2Q96A70 460 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 SCLYQ96I15 445 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 HBEGFQ99075 208 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 TINAGL1Q9GZM7 467 aaPredicted RBP9.54□□□□□ -0.88
CHD3-202ENST00000358181 NDUFAF4Q9P032 175 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 B4GALT7Q9UBV7 327 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 AP3M1Q9Y2T2 418 aa9.54□□□□□ -0.88
CHD3-202ENST00000358181 LCHNA4D1U4 455 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 A6NHS1 94 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 SLC22A3O75751 556 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 MYCLP1P12525 358 aaPredicted RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 DCDC1P59894 354 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 BLMHQ13867 455 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 GRM3Q14832 879 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 DPY19L3Q6ZPD9 716 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 LANCL3Q6ZV70 420 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 OR4K2Q8NGD2 314 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 MAPK15Q8TD08 544 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 PDLIM2Q96JY6 352 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 TGM7Q96PF1 710 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 TBCCD1Q9NVR7 557 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 MIOSQ9NXC5 875 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 GHRLQ9UBU3 117 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 REXO2Q9Y3B8 237 aaKnown RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 ANKRD33BA6NCL7 494 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 SDC3O75056 442 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 NADKO95544 446 aaPredicted RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 TUSC3Q13454 348 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 CATSPERGQ6ZRH7 1159 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 MCATQ8IVS2 390 aaKnown RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 THAP6Q8TBB0 222 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 TM9SF4Q92544 642 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 UFD1Q92890 307 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 NODALQ96S42 347 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 DENND2DQ9H6A0 471 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms