RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 TPTEP56180 551 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 MAPK7Q13164 816 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 PRKD1Q15139 912 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 PON2Q15165 354 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 EIPR1Q53HC9 387 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 TXNDC8Q6A555 127 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF571Q7Z3V5 609 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 RABEPKQ7Z6M1 372 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 STT3BQ8TCJ2 826 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 FCRL2Q96LA5 508 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 AGO3Q9H9G7 860 aaKnown RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 ETNK2Q9NVF9 386 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 MLXQ9UH92 298 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 LEF1Q9UJU2 399 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-203ENST00000357654 PCDHGB1Q9Y5G3 927 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 NLRP1Q9C000 1473 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 ZFYVE16Q7Z3T8 1539 aa5.67□□□□□ -1.5
BRCA1-203ENST00000357654 VILLO15195 856 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ERI3O43414 337 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 LRIG2O94898 1065 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 CH25HO95992 272 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 GNAO1P09471 354 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ALPIP09923 528 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 NPR2P20594 1047 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 CSKP41240 450 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 MLLT10P55197 1068 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 HABP2Q14520 560 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF267Q14586 743 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RSU1Q15404 277 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 HSPBAP1Q96EW2 488 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 SLC6A7Q99884 636 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PPCSQ9HAB8 311 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TLR9Q9NR96 1032 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PCDHGC4Q9Y5F7 938 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PCDHGA2Q9Y5H1 932 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 KDM5CP41229 1560 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 A8MVJ9 347 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TP53I11O14683 189 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 DHFRP00374 187 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 MAPTP10636 758 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ADH7P40394 386 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RPL14P50914 215 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF135P52742 658 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RHDQ02161 417 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TARDBPQ13148 414 aaKnown RBP eCLIP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 SHISA6Q6ZSJ9 500 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ADAMTSL2Q86TH1 951 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 MB21D2Q8IYB1 491 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.66□□□□□ -1.58e-23■■■■■ 41.9
BRCA1-203ENST00000357654 PLEKHO2Q8TD55 490 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PGAM5Q96HS1 289 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TMEM185BQ9H7F4 350 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 CD248Q9HCU0 757 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 GTF2IRD1Q9UHL9 959 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 EFCAB9A8MZ26 197 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 J3QLW9 94 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PRMT5O14744 637 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF19P17023 458 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 BDKRB1P46663 353 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PTENP60484 403 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 HTRA3P83110 453 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PMS2P3Q13401 168 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 BLMHQ13867 455 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 GRIN2CQ14957 1233 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ATXN7L3Q14CW9 347 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PAN3Q58A45 887 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TMEM198Q66K66 360 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 IL20RBQ6UXL0 311 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 SMIM15Q7Z3B0 74 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 OR52E4Q8NGH9 312 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 OR56B2PQ8NGI1 322 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PPP1R35Q8TAP8 253 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 DIO2Q92813 273 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ZDHHC12Q96GR4 267 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 MYRFLQ96LU7 910 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 CPEB1Q9BZB8 566 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 NANOGQ9H9S0 305 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 HSFX1Q9UBD0 423 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 STXBP5LQ9Y2K9 1186 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RBMX2Q9Y388 322 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TIMM22Q9Y584 194 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 SNX10Q9Y5X0 201 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 SPATA31A1Q5TZJ5 1347 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 FTCDNL1E5RQL4 147 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 DUX1O43812 170 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 LCMT2O60294 686 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PROCP04070 461 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 GRPRP30550 384 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 MPIP34949 423 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 MTHFRP42898 656 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 AP3S2P59780 193 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ERVK-16P61578 105 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TUSC3Q13454 348 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TMEM201Q5SNT2 666 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ARL9Q6T311 187 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 UNQ6126/PRO20091Q6UXV3 157 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 CEP76Q8TAP6 659 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TCP10LQ8TDR4 215 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 DENND1AQ8TEH3 1009 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 SLC5A5Q92911 643 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms