RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ZUFSPQ96AP4 578 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 C16orf58Q96GQ5 468 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 LMLNQ96KR4 655 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 PCDHB18PQ96TA0 734 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 CCDC32Q9BV29 185 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 C1orf196B1AJZ1 125 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 FBP2O00757 339 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 PIRTP0C851 137 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 IMPDH1P20839 514 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 CASP9P55211 416 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 MTPNP58546 118 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 NAE1Q13564 534 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 SH3PXD2AQ5TCZ1 1133 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 MSANTD2Q6P1R3 559 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 C15orf52Q6ZUT6 534 aaKnown RBP12.55□□□□□ -0.4
SMC4-202ENST00000357388 ZMIZ2Q8NF64 920 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 LCN9Q8WX39 176 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 UPF1Q92900 1129 aaKnown RBP eCLIP12.55□□□□□ -0.42e-11■■■■■ 40.4
SMC4-202ENST00000357388 TMEM246Q9BRR3 403 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 FAM83DQ9H4H8 585 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 FOLH1BQ9HBA9 442 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 SH3PXD2BA1X283 911 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 SYN3O14994 580 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 ADAMTS3O15072 1205 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 CCL16O15467 120 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 POP4O95707 220 aaKnown RBP12.55□□□□□ -0.4
SMC4-202ENST00000357388 BPNT1O95861 308 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 H1F0P07305 194 aaKnown RBP12.55□□□□□ -0.4
SMC4-202ENST00000357388 CCKBRP32239 447 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 ALDH3B2P48448 385 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 C9orf57Q5W0N0 161 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 SMARCD3Q6STE5 483 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 PDZD9Q8IXQ8 264 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 JOSD2Q8TAC2 188 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 GPR88Q9GZN0 384 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 ARHGEF4Q9NR80 690 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 CHRAC1Q9NRG0 131 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 PCDH10Q9P2E7 1040 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 NUFIP1Q9UHK0 495 aaKnown RBP12.55□□□□□ -0.4
SMC4-202ENST00000357388 FAM189A1O60320 539 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 BCAS2O75934 225 aaPredicted RBP12.55□□□□□ -0.4
SMC4-202ENST00000357388 HSD17B2P37059 387 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 BRCC3P46736 316 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 HERVK_113P63132 956 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 DNASE1L3Q13609 305 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 RHBDF2Q6PJF5 856 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 FAM156AQ8NDB6 213 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 FCAMRQ8WWV6 532 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 RAB11FIP5Q9BXF6 653 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 ERVK-6Q9BXR3 956 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 ACP6Q9NPH0 428 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 FLRT1Q9NZU1 646 aa12.55□□□□□ -0.4
SMC4-202ENST00000357388 TEX13DA0A0J9YY54 714 aaPredicted RBP12.54□□□□□ -0.4
SMC4-202ENST00000357388 C13orf42A0A1B0GVH6 325 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 MFSD11O43934 449 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 IL7RP16871 459 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 ALG10BQ5I7T1 473 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 ATAD1Q8NBU5 361 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 OR7G2Q8NG99 324 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 CANT1Q8WVQ1 401 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 PMM1Q92871 262 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 HYLS1Q96M11 299 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 DPEP2Q9H4A9 486 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 OXSMQ9NWU1 459 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 P2RX2Q9UBL9 471 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 NT5C1B-RDH14C9J2C7 533 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 HPRP00739 348 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 IFNA17P01571 189 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 ADH6P28332 368 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 MAP2K3P46734 347 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 GPRC6AQ5T6X5 926 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 KIAA1161Q6NSJ0 714 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 SLC36A4Q6YBV0 504 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 MOB2Q70IA6 237 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 TTLQ8NG68 377 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 NDRG2Q9UN36 371 aaKnown RBP12.54□□□□□ -0.4
SMC4-202ENST00000357388 SH2B3Q9UQQ2 575 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 GRIN2DO15399 1336 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 NARSO43776 548 aaKnown RBP12.54□□□□□ -0.4
SMC4-202ENST00000357388 CAP1Q01518 475 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 KIAA1614Q5VZ46 1190 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 COX18Q8N8Q8 333 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 CCDC120Q96HB5 630 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 KCNC2Q96PR1 638 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 CGREF1Q99674 301 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 TM9SF2Q99805 663 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 BCL7BQ9BQE9 202 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 C11orf84Q9BUA3 381 aaPredicted RBP12.54□□□□□ -0.4
SMC4-202ENST00000357388 PPM1HQ9ULR3 514 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 PCDHB11Q9Y5F2 797 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 SPHKAPQ2M3C7 1700 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 LOC100509620A0A075B734 347 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 A0A1W2PQH9 124 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 TISP43B9A030 160 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 XPNPEP2O43895 674 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 PRKYO43930 277 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 DNASE1P24855 282 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 TLE2Q04725 743 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 SLC13A2Q13183 592 aa12.54□□□□□ -0.4
SMC4-202ENST00000357388 PLA2G4EQ3MJ16 856 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms