RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 AP1S1P61966 158 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 CRY2Q49AN0 593 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 CFAP52Q8N1V2 620 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 TMEM74Q96NL1 305 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 NMUR1Q9HB89 426 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 C14orf119Q9NWQ9 140 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 SOHLH2Q9NX45 425 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 GLS2Q9UI32 602 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 HSPE1-MOB4S4R3N1 261 aa12.41□□□□□ -0.42
SYNCRIP-201ENST00000355238 CTSEP14091 401 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 EFNA1P20827 205 aaPredicted RBP12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 TACR2P21452 398 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 VAMP2P63027 116 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC10A7Q0GE19 358 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 PPP1R8Q12972 351 aaKnown RBP12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 ABCA11PQ4W5N1 156 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 LRRC66Q68CR7 880 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 ZNF676Q8N7Q3 588 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 NDRG1Q92597 394 aaKnown RBP12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 NTAN1Q96AB6 310 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 ITM2CQ9NQX7 267 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 P2RX2Q9UBL9 471 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 HCN4Q9Y3Q4 1203 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 CDH10Q9Y6N8 788 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 KAT7O95251 611 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 EDNRAP25101 427 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 IL1R2P27930 398 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 IGFALSP35858 605 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 EMX2Q04743 252 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 KLHL26Q53HC5 615 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 RPLP0P6Q8NHW5 317 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 NIFKQ9BYG3 293 aaKnown RBP12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 VPS29Q9UBQ0 182 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 PRKACAP17612 351 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 KCNA5P22460 613 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 HTR1EP28566 365 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 ATXN1P54253 815 aaKnown RBP12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 PON2Q15165 354 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 TNFAIP8L2Q6P589 184 aaPredicted RBP12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 FUNDC2Q9BWH2 189 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 PCBD2Q9H0N5 130 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 NUAK1O60285 661 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 NT5EP21589 574 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 E2F1Q01094 437 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 FAM46CQ5VWP2 391 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 PAQR3Q6TCH7 311 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 SLC36A4Q6YBV0 504 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 TIGD4Q8IY51 512 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 OR8J3Q8NGG0 315 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 NR4A3Q92570 626 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 EXTL2Q9UBQ6 330 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 RABL2BQ9UNT1 228 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 CDK14O94921 469 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 APOC3P02656 99 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 CDH11P55287 796 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 PRKCDQ05655 676 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 TOMM20Q15388 145 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 USP41Q3LFD5 358 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 NCBP2-AS2Q69YL0 99 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 BAIAP2L2Q6UXY1 529 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 HACD2Q6Y1H2 254 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 Q8N402 240 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 MFSD2AQ8NA29 543 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 GATA6Q92908 595 aa12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 SAV1Q9H4B6 383 aaPredicted RBP12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 FAM120CQ9NX05 1096 aaKnown RBP12.4□□□□□ -0.42
SYNCRIP-201ENST00000355238 SPATA31A5Q5VU36 1347 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 SPATA31A7Q8IWB4 1347 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 PVALBP20472 110 aaPredicted RBP12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 TUSC3Q13454 348 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 SCGB2B2Q4G0G5 96 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 SPIN4Q56A73 249 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 TAC4Q86UU9 113 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF227Q86WZ6 799 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR6K2Q8NGY2 324 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 COPS5Q92905 334 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 ALPK1Q96QP1 1244 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF304Q9HCX3 659 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 RABL2AQ9UBK7 228 aaPredicted RBP12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 SCP2D1Q9UJQ7 156 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 DUXAA6NLW8 204 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 C1RP00736 705 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 RENP00797 406 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF823P16415 610 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 MC1RQ01726 317 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 ST3GAL4Q11206 333 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 SDHAF4Q5VUM1 108 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR4F3Q6IEY1 312 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 MOB2Q70IA6 237 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 SPPL2BQ8TCT7 592 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 CDK15Q96Q40 435 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 MS4A12Q9NXJ0 267 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 MGAT4BQ9UQ53 548 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 TLX2O43763 284 aaPredicted RBP12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 MAP2K4P45985 399 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 HMGCS1Q01581 520 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 CLCA4Q14CN2 919 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 LRRC70Q7Z2Q7 622 aa12.39□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR6K6Q8NGW6 343 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms