RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 KDELR2P33947 212 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 ABRQ12979 859 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 PAGE2BQ5JRK9 111 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 NEK5Q6P3R8 708 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 CBLL1Q75N03 491 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 RNF180Q86T96 592 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 CPA6Q8N4T0 437 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 ASPSCR1Q9BZE9 553 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 SLIRPQ9GZT3 109 aaKnown RBP23.8■■□□□ 1.4
CPNE1-202ENST00000352393 KRT84Q9NSB2 600 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 ZDHHC3Q9NYG2 299 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 SAMHD1Q9Y3Z3 626 aaKnown RBP23.8■■□□□ 1.4
CPNE1-202ENST00000352393 PCDHGA4Q9Y5G9 962 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 OR2A25A4D2G3 310 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 FPGTO14772 594 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 PRAMEF4O60810 478 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 EFNA1P20827 205 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-202ENST00000352393 MAPK8P45983 427 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 CSNK1DP48730 415 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 SMAD3P84022 425 aaKnown RBP23.8■■□□□ 1.4
CPNE1-202ENST00000352393 B4GALNT1Q00973 533 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 FADDQ13158 208 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 AGAP7PQ5VUJ5 663 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 PRAMEF9Q5VWM5 478 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 NOXRED1Q6NXP6 359 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 NEK10Q6ZWH5 1172 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 EIF3MQ7L2H7 374 aaKnown RBP23.8■■□□□ 1.4
CPNE1-202ENST00000352393 PAF1Q8N7H5 531 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 CSGALNACT1Q8TDX6 532 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 SLC12A9Q9BXP2 914 aa23.8■■□□□ 1.4
CPNE1-202ENST00000352393 AFF4Q9UHB7 1163 aaKnown RBP23.8■■□□□ 1.4
CPNE1-202ENST00000352393 NPIPB15A6NHN6 443 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-202ENST00000352393 NBNO60934 754 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 SCN2BO60939 215 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 WBP4O75554 376 aaKnown RBP23.79■■□□□ 1.4
CPNE1-202ENST00000352393 PRPS1L1P21108 318 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 AOAHP28039 575 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 MAGEA10P43363 369 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-202ENST00000352393 WNT3P56703 355 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 UGT8Q16880 541 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 PROX2Q3B8N5 592 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 RETSATQ6NUM9 610 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 CADM3Q8N126 398 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 IPCEF1Q8WWN9 437 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-202ENST00000352393 PANX1Q96RD7 426 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 C2orf49Q9BVC5 232 aaPredicted RBP23.79■■□□□ 1.4
CPNE1-202ENST00000352393 SIRT5Q9NXA8 310 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 KIF17Q9P2E2 1029 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 KIAA1671Q9BY89 1806 aa23.79■■□□□ 1.4
CPNE1-202ENST00000352393 TMEM88BA6NKF7 163 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 A8MX80 341 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 AQP9O43315 295 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 GREM1O60565 184 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 EPN2O95208 641 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 ELNP15502 786 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 PTPN5P54829 565 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 PTCHD3Q3KNS1 767 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 RGMBQ6NW40 437 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 DBF4BQ8NFT6 615 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 TRMT2BQ96GJ1 504 aaKnown RBP23.78■■□□□ 1.4
CPNE1-202ENST00000352393 LYSMD1Q96S90 227 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 OSGIN1Q9UJX0 560 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 CLDN24A6NM45 220 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 C8GP07360 202 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 FRG2Q64ET8 278 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 PLEKHG7Q6ZR37 379 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 NPAS4Q8IUM7 802 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 ADAMTS19Q8TE59 1207 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 APH1BQ8WW43 257 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 RPL3LQ92901 407 aaKnown RBP23.78■■□□□ 1.4
CPNE1-202ENST00000352393 PYCR2Q96C36 320 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 FRG2BQ96QU4 278 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 EBPLQ9BY08 206 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 THUMPD1Q9NXG2 353 aaKnown RBP23.78■■□□□ 1.4
CPNE1-202ENST00000352393 LRFN2Q9ULH4 789 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 TRIM17Q9Y577 477 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 BACE2Q9Y5Z0 518 aa23.78■■□□□ 1.4
CPNE1-202ENST00000352393 PRMT3O60678 531 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 EFEMP2O95967 443 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 EIF2B2P49770 351 aaKnown RBP23.77■■□□□ 1.4
CPNE1-202ENST00000352393 IQCCQ4KMZ1 466 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 UBE2UQ5VVX9 321 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 CYP2U1Q7Z449 544 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 ATG16L2Q8NAA4 619 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 LGALS12Q96DT0 336 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 COPS8Q99627 209 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 MRPL9Q9BYD2 267 aaKnown RBP23.77■■□□□ 1.4
CPNE1-202ENST00000352393 REEP1Q9H902 201 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 PCDH12Q9NPG4 1184 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 ERVK-11Q9UQG0 969 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 NUP214P35658 2090 aaPredicted RBP23.77■■□□□ 1.4
CPNE1-202ENST00000352393 MAGEB17A8MXT2 336 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 NUAK1O60285 661 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 PCDHGA12O60330 932 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 DPM1O60762 260 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 CNOT3O75175 753 aaKnown RBP23.77■■□□□ 1.4
CPNE1-202ENST00000352393 LCKP06239 509 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 SLC10A3P09131 477 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 HNMTP50135 292 aa23.77■■□□□ 1.4
CPNE1-202ENST00000352393 SRSF11Q05519 484 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms