RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 ERLEC1Q96DZ1 483 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 SCARF2Q96GP6 870 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 CCDC115Q96NT0 180 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 BTBD9Q96Q07 612 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 TIMM29Q9BSF4 260 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 MENTQ9BUN1 341 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 EFCAB11Q9BUY7 163 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 PAIP1Q9H074 479 aaKnown RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 KCNH6Q9H252 994 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 ALG2Q9H553 416 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 C8orf33Q9H7E9 229 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 RMI1Q9H9A7 625 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 COPS7BQ9H9Q2 264 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 PREBQ9HCU5 417 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 SERHLQ9NQF3 203 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 PLSCR2Q9NRY7 297 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 FBXL12Q9NXK8 326 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 SLC25A37Q9NYZ2 338 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 VAPAQ9P0L0 249 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 VPS29Q9UBQ0 182 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 CNOT11Q9UKZ1 510 aaKnown RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 FZD4Q9ULV1 537 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 PPT2Q9UMR5 302 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 SCML1Q9UN30 329 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 SH2B3Q9UQQ2 575 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 RUVBL1Q9Y265 456 aaKnown RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 SLC17A4Q9Y2C5 497 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 AP3M1Q9Y2T2 418 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 AP4S1Q9Y587 144 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 SNX13Q9Y5W8 968 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 CKAP5Q14008 2032 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 WDFY4Q6ZS81 3184 aa6.69□□□□□ -1.34
TRIM55-203ENST00000350034 FASNP49327 2511 aaKnown RBP6.69□□□□□ -1.34
TRIM55-203ENST00000350034 COL4A2P08572 1712 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 LRRK1Q38SD2 2015 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 A0A096LPI6 279 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 A0A1W2PQU0 124 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF839A8K0R7 811 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 MAGEB17A8MXT2 336 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 H0YJX3 145 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 PI15O43692 258 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 RNGTTO60942 597 aaKnown RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 ERN1O75460 977 aaKnown RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 KCNH1O95259 989 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 ETHE1O95571 254 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 KLF8O95600 359 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 STAMBPO95630 424 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 PAK4O96013 591 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 CEACAM5P06731 702 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 GPIP06744 558 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 UMPSP11172 480 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 MYCLP1P12525 358 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 BMP2P12643 396 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 ZNF26P17031 533 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 PRPS1L1P21108 318 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 DRD1P21728 446 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 S100A3P33764 101 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 IGFALSP35858 605 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 GTF2A1P52655 376 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 ATXN3P54252 364 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 ADPRHP54922 357 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 AQP4P55087 323 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 WNT3P56703 355 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 OR4D2P58180 307 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 RAE1P78406 368 aaKnown RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 CTBSQ01459 385 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 LAPTM5Q13571 262 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 BLMHQ13867 455 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 STARD3Q14849 445 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 MAPKAPK3Q16644 382 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 DPY19L1Q2PZI1 675 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 PLA2G4EQ3MJ16 856 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 CATSPEREQ5SY80 951 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 SDE2Q6IQ49 451 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 HMBOX1Q6NT76 420 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 MED27Q6P2C8 311 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 DOK6Q6PKX4 331 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 NXPE4Q6UWF7 544 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 CYP2R1Q6VVX0 501 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 USP30Q70CQ3 517 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 CAMKMTQ7Z624 323 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 CALHM3Q86XJ0 350 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 PROSER1Q86XN7 944 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 FAM129CQ86XR2 697 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 SYTL1Q8IYJ3 562 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 RNF175Q8N4F7 328 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 ANKFN1Q8N957 763 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 SPDYE1Q8NFV5 336 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 OR52E4Q8NGH9 312 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 OR5AR1Q8NGP9 310 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 OR5K2Q8NHB8 316 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 HUS1BQ8NHY5 278 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 CANT1Q8WVQ1 401 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 SLC5A11Q8WWX8 675 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 TFGQ92734 400 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-203ENST00000350034 DNASE1L2Q92874 299 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 GATA6Q92908 595 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 REPS1Q96D71 796 aa6.68□□□□□ -1.34
TRIM55-203ENST00000350034 MED8Q96G25 268 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms