RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RHBDF1Q96CC6 855 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 PKNOX2Q96KN3 472 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 ZNF578Q96N58 590 aaPredicted RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 OR6C1Q96RD1 312 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 DPH7Q9BTV6 452 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 SGPP1Q9BX95 441 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 IQCGQ9H095 443 aaKnown RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 STMN4Q9H169 189 aaPredicted RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 MRPL46Q9H2W6 279 aaKnown RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 CCDC86Q9H6F5 360 aaKnown RBP11.39□□□□□ -0.59
SNCA-202ENST00000345009 FGF21Q9NSA1 209 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 OCIAD1Q9NX40 245 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 SENP1Q9P0U3 644 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 GRID1Q9ULK0 1009 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 PCDHGA7Q9Y5G6 932 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 PCDHGA3Q9Y5H0 932 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 KLK4Q9Y5K2 254 aa11.39□□□□□ -0.59
SNCA-202ENST00000345009 A0A1W2PPV9 198 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 COPEO14579 308 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 MAP2K7O14733 419 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 RGS16O15492 202 aaPredicted RBP11.38□□□□□ -0.59
SNCA-202ENST00000345009 BRINP1O60477 761 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 SRPX2O60687 465 aaPredicted RBP11.38□□□□□ -0.59
SNCA-202ENST00000345009 H2AFYO75367 372 aaKnown RBP11.38□□□□□ -0.59
SNCA-202ENST00000345009 STK16O75716 305 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 HGFP14210 728 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 PVRP15151 417 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 KRT4P19013 534 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 GNAZP19086 355 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 MAGP20916 626 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 PEBP1P30086 187 aaKnown RBP11.38□□□□□ -0.59
SNCA-202ENST00000345009 GGT5P36269 586 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 GRIA3P42263 894 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 ALDH18A1P54886 795 aaKnown RBP11.38□□□□□ -0.59
SNCA-202ENST00000345009 RELAQ04206 551 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 DLG1Q12959 904 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 PTCHD3Q3KNS1 767 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.38□□□□□ -0.59
SNCA-202ENST00000345009 BEND6Q5SZJ8 279 aaPredicted RBP11.38□□□□□ -0.59
SNCA-202ENST00000345009 KIAA1614Q5VZ46 1190 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 METTL2BQ6P1Q9 378 aaKnown RBP11.38□□□□□ -0.59
SNCA-202ENST00000345009 LRIG3Q6UXM1 1119 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 CLEC14AQ86T13 490 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 PDPRQ8NCN5 879 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 FLVCR1-AS1Q8TAF5 88 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 USP7Q93009 1102 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 PPM1MQ96MI6 270 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 GPR78Q96P69 363 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 ATOH8Q96SQ7 321 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 SLC7A5P2Q9GIP4 190 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 KLHL25Q9H0H3 589 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 CENPHQ9H3R5 247 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 TMEM184CQ9NVA4 438 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 IRAK4Q9NWZ3 460 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 LGALS13Q9UHV8 139 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 IKZF3Q9UKT9 509 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 PLCL2Q9UPR0 1127 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 ANGPTL3Q9Y5C1 460 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 AP1M2Q9Y6Q5 423 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 ACACBO00763 2458 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 SEC16AO15027 2179 aa11.38□□□□□ -0.59
SNCA-202ENST00000345009 TMEM8BA6NDV4 472 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 TMEM150CB9EJG8 249 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 H7BY64 318 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 GOLGA8RI6L899 631 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 UBXN8O00124 270 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 TXNDC9O14530 226 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 CLGNO14967 610 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 GLRA3O75311 464 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 WDR47O94967 919 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 HBQ1P09105 142 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 EBLN1P0CF75 366 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 FGF5P12034 268 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 EZRP15311 586 aaKnown RBP11.37□□□□□ -0.59
SNCA-202ENST00000345009 FOLR1P15328 257 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 NPPBP16860 134 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 ITIH1P19827 911 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 CXCR2P25025 360 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 PSMB5P28074 263 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 PIK3CGP48736 1102 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 CCR8P51685 355 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 ITGA1P56199 1179 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 SH3BP2P78314 561 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 CYP4F3Q08477 520 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 KCNAB1Q14722 419 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 PFKFB4Q16877 469 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 CCDC153Q494R4 210 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 TCTE1Q5JU00 501 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 CEP85LQ5SZL2 805 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 THOC6Q86W42 341 aaKnown RBP11.37□□□□□ -0.59
SNCA-202ENST00000345009 MCATQ8IVS2 390 aaKnown RBP11.37□□□□□ -0.59
SNCA-202ENST00000345009 PLD6Q8N2A8 252 aaKnown RBP11.37□□□□□ -0.59
SNCA-202ENST00000345009 BMPERQ8N8U9 685 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 FGF11Q92914 225 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 RERGQ96A58 199 aaPredicted RBP11.37□□□□□ -0.59
SNCA-202ENST00000345009 PYCR2Q96C36 320 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 CCDC126Q96EE4 140 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 PRAP1Q96NZ9 151 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 SMC6Q96SB8 1091 aa11.37□□□□□ -0.59
SNCA-202ENST00000345009 PLCD4Q9BRC7 762 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms